miRNEST 2.0, an integrative microRNA resource :: BLAST
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 119 bits (60), Expect = 6e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagctggctggacatgac 60
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggctcgacatgac 70
Query: 61 tggttgtt 68
||||||||
Sbjct: 71 tggttgtt 78
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 109 tagcgaattggatcccgccttgcatcaactga 140
||||||||||||||||||||||||||||||||
Sbjct: 121 tagcgaattggatcccgccttgcatcaactga 152
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 93.7 bits (47), Expect = 3e-20
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagctggct 51
||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 11 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggct 61
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 113 gaattggatcccgccttgcatcaactga 140
||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactga 128
>41215_crt-MIR168:mirbase
Length = 201
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 111 gcgaattggatcccgccttgcatcaactga 140
||||||||||||||||||||||||||||||
Sbjct: 132 gcgaattggatcccgccttgcatcaactga 161
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgatt 27
|||||||||||||||||||||||||||
Sbjct: 21 tcgcttggtgcaggtcgggaactgatt 47
>41210_ccl-MIR168:mirbase
Length = 176
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 111 gcgaattggatcccgccttgcatcaactga 140
||||||||||||||||||||||||||||||
Sbjct: 131 gcgaattggatcccgccttgcatcaactga 160
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgatt 27
|||||||||||||||||||||||||||
Sbjct: 20 tcgcttggtgcaggtcgggaactgatt 46
>41101_tcc-MIR168:mirbase
Length = 167
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 112 cgaattggatcccgccttgcatcaactga 140
|||||||||||||||||||||||||||||
Sbjct: 117 cgaattggatcccgccttgcatcaactga 145
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgatt 27
|||||||||||||||||||||||||||
Sbjct: 21 tcgcttggtgcaggtcgggaactgatt 47
>40448_gma-MIR168:mirbase
Length = 125
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 112 cgaattggatcccgccttgcatcaactga 140
|||||||||||||||||||||||||||||
Sbjct: 78 cgaattggatcccgccttgcatcaactga 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaac 40
>40355_rco-MIR168:mirbase
Length = 131
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 113 gaattggatcccgccttgcatcaactga 140
||||||||||||||||||||||||||||
Sbjct: 97 gaattggatcccgccttgcatcaactga 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgatt 27
|||||||||||||||||||||||||||
Sbjct: 6 tcgcttggtgcaggtcgggaactgatt 32
>40271_bna-MIR168:mirbase
Length = 133
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgatt 27
|||||||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaactgatt 44
>40044_ath-MIR168b:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgatt 27
|||||||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaactgatt 45
>39833_aly-MIR168b:mirbase
Length = 176
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgatt 27
|||||||||||||||||||||||||||
Sbjct: 43 tcgcttggtgcaggtcgggaactgatt 69
>40043_ath-MIR168a:mirbase
Length = 138
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 attggatcccgccttgcatcaactga 140
||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactga 121
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattcggc 31
|||||||||||||||||||||| |||||||
Sbjct: 18 tcgcttggtgcaggtcgggaaccaattcggc 48
>39832_aly-MIR168a:mirbase
Length = 155
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 attggatcccgccttgcatcaactga 140
||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactga 127
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattcggc 31
|||||||||||||||||||||| |||||||
Sbjct: 24 tcgcttggtgcaggtcgggaaccaattcggc 54
>41596_vvi-MIR168:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaac 32
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 119 gatcccgccttgcatcaactga 140
||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactga 120
