miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41030_pvu-MIR2118:mirbase
Length = 125
Score = 172 bits (87), Expect = 3e-44
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 9 atgggagatgggtgggttggtaaaacataagagaatgaatatttctcactctgttttgcc 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 atgggagatgggtgggttggtaaaacataagagaatgaatatttctcactctgttttgcc 77
Query: 69 gattccacccattcctatgatttcctt 95
|||||||||||||||||||||||||||
Sbjct: 78 gattccacccattcctatgatttcctt 104
>40642_gso-MIR2218:mirbase
Length = 111
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 62 ttttgccgattccacccattcctatgattt 91
||||||||||||||||||||||||||||||
Sbjct: 77 ttttgccgattccacccattcctatgattt 106
>40777_mtr-MIR2118:mirbase
Length = 159
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 67 ccgattccacccattcctatgatttcctt 95
|||||||||||||||||||| ||||||||
Sbjct: 101 ccgattccacccattcctattatttcctt 129
