miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42602_sbi-MIR437b:mirbase
Length = 171
Score = 339 bits (171), Expect = 4e-94
Identities = 171/171 (100%)
Strand = Plus / Plus
Query: 1 tcaaacttctctaattttgatcaatgttatacaaaaatatattagcatatacaatactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcaaacttctctaattttgatcaatgttatacaaaaatatattagcatatacaatactaa 60
Query: 61 ataaaagcattatcaagacatatttcatggtagatgtaatgaaataatttgatgtttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataaaagcattatcaagacatatttcatggtagatgtaatgaaataatttgatgtttcag 120
Query: 121 atgttggtgcatttttctataaacttggtcaaagttagagaagtttgactt 171
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgttggtgcatttttctataaacttggtcaaagttagagaagtttgactt 171
>42606_sbi-MIR437f:mirbase
Length = 174
Score = 149 bits (75), Expect = 8e-37
Identities = 151/173 (87%), Gaps = 5/173 (2%)
Strand = Plus / Plus
Query: 1 tcaaacttctctaattttgatcaatgt-tatacaaaaatatattagcatatacaatacta 59
|||||||||||||| ||||| || || | || |||||||||||| ||| |||||||| |
Sbjct: 3 tcaaacttctctaactttgaaaaaagtctgtagaaaaatatattaacatctacaatacca 62
Query: 60 aataaaagcattatcaagacatatttcatggtagatgtaatgaaa-taatttgatgtttc 118
|||||| ||| ||||||||||||||||||| | ||| |||||||| ||||||| ||||
Sbjct: 63 aataaatgcactatcaagacatatttcatgttggatttaatgaaactaatttgttgtt-- 120
Query: 119 agatgttggtgcatttttctataaacttggtcaaagttagagaagtttgactt 171
||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 -gatcttggtgcacttttctataaacttggtcaaagttagagaagtttgactt 172
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 149 tcaaagttagagaagtttgact 170
||||||||||||||||||||||
Sbjct: 22 tcaaagttagagaagtttgact 1
>42619_sbi-MIR437t:mirbase
Length = 170
Score = 103 bits (52), Expect = 4e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 108 tttgatgtttcagatgttggtgcatttttctataaacttggtcaaagttagagaagtttg 167
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tttgatgtagcagatgtttgtgcatttttctataaacttggtcaaagttagagaagtttg 166
Query: 168 actt 171
||||
Sbjct: 167 actt 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 142 aacttggtcaaagttagagaagtttgac 169
||||||||||||| |||| |||||||||
Sbjct: 28 aacttggtcaaagatagacaagtttgac 1
>42607_sbi-MIR437g:mirbase
Length = 176
Score = 99.6 bits (50), Expect = 7e-22
Identities = 99/114 (86%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 59 aaataaaagcattatcaagacatatttcatggtagatgtaatgaaa-taatttgatgttt 117
||||||| ||| |||||||||||||||||| | || | ||||| || |||||||||
Sbjct: 61 aaataaatgcactatcaagacatatttcatagagaatttggtgaaactagtttgatgttg 120
Query: 118 cagatgttggtgcatttttctataaacttggtcaaagttagagaagtttgactt 171
|||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagatgttgatgcaattttctataaacttggtcaaagttagagaagtttgactt 174
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 141 aaacttggtcaaagttagagaagtttgact 170
|||||| |||||||||||| ||||||||||
Sbjct: 31 aaacttagtcaaagttagaaaagtttgact 2
>42475_ssp-MIR437a:mirbase
Length = 175
Score = 97.6 bits (49), Expect = 3e-21
Identities = 145/173 (83%), Gaps = 3/173 (1%)
Strand = Plus / Minus
Query: 1 tcaaacttctctaattttgatcaatgttatacaaaaa-tatattagcatatacaatacta 59
|||||||||||||| ||||||||| || || ||||| ||||||| ||| ||||| |
Sbjct: 172 tcaaacttctctaactttgatcaagtttttagaaaaaatatattatcatctacaa-gttc 114
Query: 60 aataaaagcattatcaagacatatttcatggtagatgtaat-gaaataatttgatgtttc 118
|||||| |||||||||| | ||||||||||| || |||| ||| || |||||| ||
Sbjct: 113 aataaatgcattatcaaaatatatttcatggagaatttaatggaactagtttgatattct 54
Query: 119 agatgttggtgcatttttctataaacttggtcaaagttagagaagtttgactt 171
|||| |||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 53 agattttggtgcatttttctataaacttgatcaaagttagagaggtttgactt 1
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 132 tttttctataaacttggtcaaagttagagaagtttgactt 171
|||||||| ||||||| |||||||||||||||||||||||
Sbjct: 136 tttttctaaaaacttgatcaaagttagagaagtttgactt 175
>42621_sbi-MIR437v:mirbase
Length = 114
Score = 89.7 bits (45), Expect = 6e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 119 agatgttggtgcatttttctataaacttggtcaaagttagagaagtttgactt 171
|||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 62 agatgttgatgcatttttctataaacttggacaaagttagagaagtttgactt 114
>42608_sbi-MIR437i:mirbase
Length = 170
Score = 85.7 bits (43), Expect = 1e-17
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 125 tggtgcatttttctataaacttggtcaaagttagagaagtttgactt 171
|||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 124 tggtgcatttttctataaactttgtcaaagttagagaagtttgactt 170
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 134 tttctataaacttggtcaaagttagagaagtttgac 169
|||||| ||||||||||||||||| |||||||||||
Sbjct: 36 tttctagaaacttggtcaaagttaaagaagtttgac 1
>42615_sbi-MIR437p:mirbase
Length = 188
Score = 81.8 bits (41), Expect = 2e-16
Identities = 88/101 (87%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 73 tcaagacatatttcatggtagatgtaatgaaa-taatttgatgtttcagatgttggtgca 131
|||||||| |||||||||| ||| | |||||| ||||||||| || | ||||||| ||
Sbjct: 86 tcaagacaaatttcatggtggatttgatgaaactaatttgattttgtatgtgttggtcca 145
Query: 132 ttttt-ctataaacttggtcaaagttagagaagtttgactt 171
||||| | |||||||||||||||||||||||||||||||||
Sbjct: 146 ttttttcaataaacttggtcaaagttagagaagtttgactt 186
>42063_osa-MIR437:mirbase
Length = 213
Score = 81.8 bits (41), Expect = 2e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 131 atttttctataaacttggtcaaagttagagaagtttgactt 171
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 atttttctataaacttggtcaaagttagagaagtttgactt 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 131 atttttctataaacttggtcaaagttagagaagtttgactt 171
||||| ||| ||||||||||||||| | |||| ||||||||
Sbjct: 80 attttactacaaacttggtcaaagtaaaagaattttgactt 40
>42620_sbi-MIR437u:mirbase
Length = 164
Score = 79.8 bits (40), Expect = 6e-16
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 97 taatgaaa-taatttgatgtttcagatgttggtgcatttttctataaacttggtcaaagt 155
|||||||| ||||||||||| |||| |||| | ||||||||||||||||||| |||||
Sbjct: 89 taatgaaactaatttgatgtcatagatattggcgtatttttctataaacttggtgaaagt 148
Query: 156 tagagaagtttgactt 171
||||||||||||||||
Sbjct: 149 tagagaagtttgactt 164
>42604_sbi-MIR437d:mirbase
Length = 136
Score = 79.8 bits (40), Expect = 6e-16
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 124 ttggtgcatttttctataaacttggtcaaagttagagaagtttgactt 171
|||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 87 ttggtgcattttcctataaacttggttaaagttagagaagtttgactt 134
>42609_sbi-MIR437j:mirbase
Length = 172
Score = 75.8 bits (38), Expect = 1e-14
Identities = 45/46 (97%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 124 ttggtgcatttttctataaacttggtcaaagttagagaagtttgac 169
|||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 45 ttggtgcatttt-ctataaacttggtcaaagttagagaagtttgac 1
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 141 aaacttggtcaaagttagagaagtttgactt 171
|||| ||||||||||||||||||||||||||
Sbjct: 142 aaacatggtcaaagttagagaagtttgactt 172
>42610_sbi-MIR437k:mirbase
Length = 172
Score = 73.8 bits (37), Expect = 4e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 131 atttttctataaacttggtcaaagttagagaagtttgactt 171
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 130 atttttctaaaaacttggtcaaagttagagaagtttgactt 170
Score = 71.9 bits (36), Expect = 1e-13
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 122 tgttggtgcatttttctataaacttggtcaaagttagagaagtttgac 169
|||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 50 tgttggtgtatttttctataagtttggtcaaagttagagaagtttgac 3
>42617_sbi-MIR437r:mirbase
Length = 180
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 134 tttctataaacttggtcaaagttagagaagtttgactt 171
||||||||||||||| ||||||||||||||||||||||
Sbjct: 141 tttctataaacttggccaaagttagagaagtttgactt 178
Score = 52.0 bits (26), Expect = 1e-07
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 105 taatttgatgtttcagatgttggtgcatttttctataaacttggtcaaagttagagaagt 164
|||||||||||| | || || || |||||||||||| ||||||||||| | ||||||||
Sbjct: 66 taatttgatgttgtaaatattagtacatttttctatagacttggtcaaaataagagaagt 7
Query: 165 tt 166
||
Sbjct: 6 tt 5
>42613_sbi-MIR437n:mirbase
Length = 182
Score = 65.9 bits (33), Expect = 9e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 131 atttttctataaacttggtcaaagttagagaagtttgactt 171
||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 140 atttttctacaaacttggttaaagttagagaagtttgactt 180
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 133 ttttctataaacttggtcaaagttagaga 161
|||||||||||||||||||||||| ||||
Sbjct: 39 ttttctataaacttggtcaaagttggaga 11
>42611_sbi-MIR437l:mirbase
Length = 170
Score = 65.9 bits (33), Expect = 9e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 131 atttttctataaacttggtcaaagttagagaagtttgactt 171
||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 130 atttttctaaaaacttggccaaagttagagaagtttgactt 170
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 122 tgttggtgcatttttctataaacttggtcaaagtta 157
|||||||||||||||||||||| |||||||| ||||
Sbjct: 48 tgttggtgcatttttctataaatttggtcaatgtta 13
>42605_sbi-MIR437e:mirbase
Length = 101
Score = 65.9 bits (33), Expect = 9e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 131 atttttctataaacttggtcaaagttagagaagtttgactt 171
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 atttttctgaaaacttggtcaaagttagagaagtttgactt 101
>42622_sbi-MIR437w:mirbase
Length = 173
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 132 tttttctataaacttggtcaaagttagagaagtttgactt 171
|||||||| ||||||||| |||||||||||||||||||||
Sbjct: 134 tttttctaaaaacttggtgaaagttagagaagtttgactt 173
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 105 taatttgatgtttcagatgttggtgcatttttctataaacttggt 149
|||||||||||| | |||||| ||||||||||||||||||||||
Sbjct: 63 taatttgatgttggaaatgttgatgcatttttctataaacttggt 19
>42476_ssp-MIR437b:mirbase
Length = 172
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 131 atttttctataaacttggtcaaagttagagaagtttgac 169
|||||| |||||||||||||||||||||| |||||||||
Sbjct: 132 atttttgtataaacttggtcaaagttagacaagtttgac 170
Score = 50.1 bits (25), Expect = 5e-07
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 1 tcaaacttctctaattttgatcaatgttatacaaaaatatattagcatatacaatactaa 60
|||||||| ||||| ||||| ||| |||||||||||||||||| || | ||||| ||
Sbjct: 169 tcaaacttgtctaactttgaccaagtttatacaaaaatatattaatatctgcaatatcaa 110
Query: 61 ataaaagcattatcaagacatatttcatg 89
||||| ||| |||||| ||||||||||
Sbjct: 109 ataaatgcactatcaaagtatatttcatg 81
>42631_sbi-MIR1435a:mirbase
Length = 287
Score = 60.0 bits (30), Expect = 6e-10
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 78 acatatttcatggtagatgtaatgaaataat-ttgatgtttcagatgttggtgcattttt 136
||||||||||||| ||| |||||||| || |||||||| |||||||| ||||| |||
Sbjct: 150 acatatttcatggaggatttaatgaaacaaacttgatgttgtagatgttgatgcatcttt 209
Query: 137 ctataaacttggtcaaag 154
|| |||||||||||||||
Sbjct: 210 ctgtaaacttggtcaaag 227
>42612_sbi-MIR437m:mirbase
Length = 174
Score = 58.0 bits (29), Expect = 2e-09
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 105 taatttgatgtttcagatgttggtgcatttttctataaacttggtcaaagttagagaagt 164
||||||||| || ||||||||||||||||||||| |||||| | ||||||||| |||
Sbjct: 65 taatttgatattctagatgttggtgcatttttctagtaacttgtttaaagttagatgagt 6
Query: 165 ttgac 169
|||||
Sbjct: 5 ttgac 1
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/41 (92%), Gaps = 2/41 (4%)
Strand = Plus / Plus
Query: 133 ttttctataaacttggtcaaa--gttagagaagtttgactt 171
||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 132 ttttctaaaaacttggtcaaaaagttagagaagtttgactt 172
>42618_sbi-MIR437s:mirbase
Length = 176
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 132 tttttctataaacttggtcaaagttagagaagtttgactt 171
||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 40 tttttctataaacctggacaaagttaaagaagtttgactt 1
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 147 ggtcaaagttagagaagtttgactt 171
|||||||||||||||||||||||||
Sbjct: 150 ggtcaaagttagagaagtttgactt 174
>42614_sbi-MIR437o:mirbase
Length = 175
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 132 tttttctataaacttggtcaaagttagagaagtttgactt 171
||||| || |||||| ||||||||||||||||||||||||
Sbjct: 134 tttttataaaaacttagtcaaagttagagaagtttgactt 173
Score = 50.1 bits (25), Expect = 5e-07
Identities = 71/85 (83%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 61 ataaaagcattatcaagacatatttcatggtagatgtaatgaaa-taatttgatgtttca 119
||||| ||| || ||||||||||||||| | || |||||||| |||||||||||| |
Sbjct: 109 ataaatgcactaccaagacatatttcatagagaatttaatgaaactaatttgatgttgta 50
Query: 120 gatgttggtgcatttttctataaac 144
|| | ||||||||||||||| ||||
Sbjct: 49 gaggatggtgcatttttctaaaaac 25
>41838_bdi-MIR5169:mirbase
Length = 210
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 119 agatgttggtgcatttttctataaacttggtcaaa 153
|||||||||| |||||||||||||||||||||||
Sbjct: 143 agatgttggtatatttttctataaacttggtcaaa 177
>42616_sbi-MIR437q:mirbase
Length = 160
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 134 tttctataaacttggtcaaagttagagaagtttgactt 171
|||||||| | ||||| |||||||||||||||||||||
Sbjct: 121 tttctatagagttggtaaaagttagagaagtttgactt 158
>42477_ssp-MIR437c:mirbase
Length = 177
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 131 atttttctataaacttggtcaaagttagagaagtttgactt 171
||||||||| || |||||||||||||||||||| ||||||
Sbjct: 137 atttttctaaaactttggtcaaagttagagaagtctgactt 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 5 acttctctaattttgatcaatgttatacaaaaatatattagcatatacaa 54
|||||||||| ||||| ||| ||| || |||||||||||| ||| |||||
Sbjct: 170 acttctctaactttgaccaaagttttagaaaaatatattaacatctacaa 121
>42601_sbi-MIR437a:mirbase
Length = 190
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 148 gtcaaagttagagaagtttgactt 171
||||||||||||||||||||||||
Sbjct: 165 gtcaaagttagagaagtttgactt 188
>42603_sbi-MIR437c:mirbase
Length = 175
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 149 tcaaagttagagaagtttgactt 171
|||||||||||||||||||||||
Sbjct: 153 tcaaagttagagaagtttgactt 175
