miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42604_sbi-MIR437d:mirbase
Length = 136
Score = 270 bits (136), Expect = 2e-73
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 1 aagtcaatcttctctaactcgaagagtttatatattaacatctatatctatacaagataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcaatcttctctaactcgaagagtttatatattaacatctatatctatacaagataa 60
Query: 61 atgaacctaatgtgatgttgtaaatattggtgcattttcctataaacttggttaaagtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgaacctaatgtgatgttgtaaatattggtgcattttcctataaacttggttaaagtta 120
Query: 121 gagaagtttgacttgg 136
||||||||||||||||
Sbjct: 121 gagaagtttgacttgg 136
>42602_sbi-MIR437b:mirbase
Length = 171
Score = 79.8 bits (40), Expect = 5e-16
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 87 ttggtgcattttcctataaacttggttaaagttagagaagtttgactt 134
|||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 124 ttggtgcatttttctataaacttggtcaaagttagagaagtttgactt 171
>42620_sbi-MIR437u:mirbase
Length = 164
Score = 77.8 bits (39), Expect = 2e-15
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 60 aatgaacctaatgtgatgttgtaaatattggtgcattttcctataaacttggttaaagtt 119
|||||| ||||| |||||| || ||||||| | ||||| ||||||||||||| ||||||
Sbjct: 90 aatgaaactaatttgatgtcatagatattggcgtatttttctataaacttggtgaaagtt 149
Query: 120 agagaagtttgactt 134
|||||||||||||||
Sbjct: 150 agagaagtttgactt 164
>42608_sbi-MIR437i:mirbase
Length = 170
Score = 75.8 bits (38), Expect = 7e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 73 tgatgttgtaaatattggtgcattttcctataaacttggttaaagttagagaagtttgac 132
||||| |||| ||| ||||||||||| |||||||||| || |||||||||||||||||||
Sbjct: 109 tgatggtgtagataatggtgcatttttctataaactttgtcaaagttagagaagtttgac 168
Query: 133 tt 134
||
Sbjct: 169 tt 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 104 aaacttggttaaagttagagaagtttgac 132
||||||||| ||||||| |||||||||||
Sbjct: 29 aaacttggtcaaagttaaagaagtttgac 1
>42607_sbi-MIR437g:mirbase
Length = 176
Score = 75.8 bits (38), Expect = 7e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 73 tgatgttgtaaatattggtgcattttcctataaacttggttaaagttagagaagtttgac 132
|||||||||| || ||| |||| ||| ||||||||||||| |||||||||||||||||||
Sbjct: 113 tgatgttgtagatgttgatgcaattttctataaacttggtcaaagttagagaagtttgac 172
Query: 133 tt 134
||
Sbjct: 173 tt 174
>42619_sbi-MIR437t:mirbase
Length = 170
Score = 73.8 bits (37), Expect = 3e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 90 gtgcattttcctataaacttggttaaagttagagaagtttgactt 134
||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 126 gtgcatttttctataaacttggtcaaagttagagaagtttgactt 170
>42609_sbi-MIR437j:mirbase
Length = 172
Score = 71.9 bits (36), Expect = 1e-13
Identities = 46/48 (95%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 85 tattggtgcattttcctataaacttggttaaagttagagaagtttgac 132
||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 47 tattggtgcattttc-tataaacttggtcaaagttagagaagtttgac 1
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 104 aaacttggttaaagttagagaagtttgactt 134
|||| |||| |||||||||||||||||||||
Sbjct: 142 aaacatggtcaaagttagagaagtttgactt 172
>42606_sbi-MIR437f:mirbase
Length = 174
Score = 71.9 bits (36), Expect = 1e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 87 ttggtgcattttcctataaacttggttaaagttagagaagtttgactt 134
|||||||| ||| ||||||||||||| |||||||||||||||||||||
Sbjct: 125 ttggtgcacttttctataaacttggtcaaagttagagaagtttgactt 172
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 114 aaagttagagaagtttgact 133
||||||||||||||||||||
Sbjct: 20 aaagttagagaagtttgact 1
>42621_sbi-MIR437v:mirbase
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 73 tgatgttgtaaatattggtgcattttcctataaacttggttaaagttagagaagtttgac 132
|||| ||||| || ||| |||||||| |||||||||||| |||||||||||||||||||
Sbjct: 53 tgatattgtagatgttgatgcatttttctataaacttggacaaagttagagaagtttgac 112
Query: 133 tt 134
||
Sbjct: 113 tt 114
>42613_sbi-MIR437n:mirbase
Length = 182
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 94 attttcctataaacttggttaaagttagagaagtttgactt 134
||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 140 atttttctacaaacttggttaaagttagagaagtttgactt 180
>42063_osa-MIR437:mirbase
Length = 213
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 94 attttcctataaacttggttaaagttagagaagtttgactt 134
||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 135 atttttctataaacttggtcaaagttagagaagtttgactt 175
>42475_ssp-MIR437a:mirbase
Length = 175
Score = 63.9 bits (32), Expect = 3e-11
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 87 ttggtgcattttcctataaacttggttaaagttagagaagtttgactt 134
|||||||||||| ||||||||||| | ||||||||||| |||||||||
Sbjct: 48 ttggtgcatttttctataaacttgatcaaagttagagaggtttgactt 1
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 95 ttttcctataaacttggttaaagttagagaagtttgactt 134
|||| ||| ||||||| | |||||||||||||||||||||
Sbjct: 136 tttttctaaaaacttgatcaaagttagagaagtttgactt 175
>42617_sbi-MIR437r:mirbase
Length = 180
Score = 61.9 bits (31), Expect = 1e-10
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 67 ctaatgtgatgttgtaaatattggtgcattttcctataaacttggttaaagttagagaag 126
||||| |||||||||||||||| || |||||| ||||| ||||||| ||| | |||||||
Sbjct: 67 ctaatttgatgttgtaaatattagtacatttttctatagacttggtcaaaataagagaag 8
Query: 127 ttt 129
|||
Sbjct: 7 ttt 5
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 100 ctataaacttggttaaagttagagaagtttgactt 134
|||||||||||| |||||||||||||||||||||
Sbjct: 144 ctataaacttggccaaagttagagaagtttgactt 178
>42615_sbi-MIR437p:mirbase
Length = 188
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 102 ataaacttggttaaagttagagaagtttgactt 134
||||||||||| |||||||||||||||||||||
Sbjct: 154 ataaacttggtcaaagttagagaagtttgactt 186
>42610_sbi-MIR437k:mirbase
Length = 172
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 94 attttcctataaacttggttaaagttagagaagtttgactt 134
||||| ||| ||||||||| |||||||||||||||||||||
Sbjct: 130 atttttctaaaaacttggtcaaagttagagaagtttgactt 170
Score = 52.0 bits (26), Expect = 1e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 87 ttggtgcattttcctataaacttggttaaagttagagaagtttgac 132
|||||| ||||| |||||| ||||| |||||||||||||||||||
Sbjct: 48 ttggtgtatttttctataagtttggtcaaagttagagaagtttgac 3
>42622_sbi-MIR437w:mirbase
Length = 173
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 95 ttttcctataaacttggttaaagttagagaagtttgactt 134
|||| ||| ||||||||| |||||||||||||||||||||
Sbjct: 134 tttttctaaaaacttggtgaaagttagagaagtttgactt 173
Score = 52.0 bits (26), Expect = 1e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 67 ctaatgtgatgttgtaaatattggtgcattttcctataaacttggt 112
||||| |||||||| |||| ||| |||||||| |||||||||||||
Sbjct: 64 ctaatttgatgttggaaatgttgatgcatttttctataaacttggt 19
>42605_sbi-MIR437e:mirbase
Length = 101
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 104 aaacttggttaaagttagagaagtttgactt 134
||||||||| |||||||||||||||||||||
Sbjct: 71 aaacttggtcaaagttagagaagtttgactt 101
>42612_sbi-MIR437m:mirbase
Length = 174
Score = 50.1 bits (25), Expect = 4e-07
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 60 aatgaacctaatgtgatgttgtaaatattggtgcattttcctataaacttggttaaagtt 119
|||||| ||||| |||| || || || |||||||||||| ||| |||||| ||||||||
Sbjct: 73 aatgaagctaatttgatattctagatgttggtgcatttttctagtaacttgtttaaagtt 14
Query: 120 agagaagtttgac 132
||| ||||||||
Sbjct: 13 agatgagtttgac 1
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 114 aaagttagagaagtttgactt 134
|||||||||||||||||||||
Sbjct: 152 aaagttagagaagtttgactt 172
>42611_sbi-MIR437l:mirbase
Length = 170
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 94 attttcctataaacttggttaaagttagagaagtttgactt 134
||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 130 atttttctaaaaacttggccaaagttagagaagtttgactt 170
>42476_ssp-MIR437b:mirbase
Length = 172
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 101 tataaacttggttaaagttagagaagtttgac 132
|||||||||||| ||||||||| |||||||||
Sbjct: 139 tataaacttggtcaaagttagacaagtttgac 170
>42616_sbi-MIR437q:mirbase
Length = 160
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 108 ttggttaaagttagagaagtttgactt 134
||||| |||||||||||||||||||||
Sbjct: 132 ttggtaaaagttagagaagtttgactt 158
>42614_sbi-MIR437o:mirbase
Length = 175
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 104 aaacttggttaaagttagagaagtttgactt 134
|||||| || |||||||||||||||||||||
Sbjct: 143 aaacttagtcaaagttagagaagtttgactt 173
>42618_sbi-MIR437s:mirbase
Length = 176
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 114 aaagttagagaagtttgactt 134
|||||||||||||||||||||
Sbjct: 154 aaagttagagaagtttgactt 174
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 95 ttttcctataaacttggttaaagttagagaagtttgactt 134
|||| |||||||| ||| ||||||| |||||||||||||
Sbjct: 40 tttttctataaacctggacaaagttaaagaagtttgactt 1
>42603_sbi-MIR437c:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 114 aaagttagagaagtttgactt 134
|||||||||||||||||||||
Sbjct: 155 aaagttagagaagtttgactt 175
>42601_sbi-MIR437a:mirbase
Length = 190
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 114 aaagttagagaagtttgactt 134
|||||||||||||||||||||
Sbjct: 168 aaagttagagaagtttgactt 188
