miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42605_sbi-MIR437e:mirbase
Length = 101
Score = 200 bits (101), Expect = 1e-52
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 1 cagattactgattttgatcaacattgtctgaaatactaaatcaattagatgttaatatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagattactgattttgatcaacattgtctgaaatactaaatcaattagatgttaatatat 60
Query: 61 atttttctgaaaacttggtcaaagttagagaagtttgactt 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atttttctgaaaacttggtcaaagttagagaagtttgactt 101
>42610_sbi-MIR437k:mirbase
Length = 172
Score = 77.8 bits (39), Expect = 1e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 59 atatttttctgaaaacttggtcaaagttagagaagtttgactt 101
|||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 128 atatttttctaaaaacttggtcaaagttagagaagtttgactt 170
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 75 ttggtcaaagttagagaagtttgac 99
|||||||||||||||||||||||||
Sbjct: 27 ttggtcaaagttagagaagtttgac 3
>42611_sbi-MIR437l:mirbase
Length = 170
Score = 73.8 bits (37), Expect = 2e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 57 atatatttttctgaaaacttggtcaaagttagagaagtttgactt 101
|||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 126 atatatttttctaaaaacttggccaaagttagagaagtttgactt 170
>42475_ssp-MIR437a:mirbase
Length = 175
Score = 71.9 bits (36), Expect = 8e-14
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 46 tagatgttaatatatatttttctgaaaacttggtcaaagttagagaagtttgactt 101
|||||| |||||||| ||||||| |||||||| |||||||||||||||||||||||
Sbjct: 121 tagatgataatatat-tttttctaaaaacttgatcaaagttagagaagtttgactt 175
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 61 atttttctgaaaacttggtcaaagttagagaagtttgactt 101
|||||||| ||||||| ||||||||||||| |||||||||
Sbjct: 41 atttttctataaacttgatcaaagttagagaggtttgactt 1
>42619_sbi-MIR437t:mirbase
Length = 170
Score = 65.9 bits (33), Expect = 5e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 61 atttttctgaaaacttggtcaaagttagagaagtttgactt 101
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 130 atttttctataaacttggtcaaagttagagaagtttgactt 170
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 72 aacttggtcaaagttagagaagtttgac 99
||||||||||||| |||| |||||||||
Sbjct: 28 aacttggtcaaagatagacaagtttgac 1
>42602_sbi-MIR437b:mirbase
Length = 171
Score = 65.9 bits (33), Expect = 5e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 61 atttttctgaaaacttggtcaaagttagagaagtttgactt 101
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 131 atttttctataaacttggtcaaagttagagaagtttgactt 171
>42063_osa-MIR437:mirbase
Length = 213
Score = 65.9 bits (33), Expect = 5e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 61 atttttctgaaaacttggtcaaagttagagaagtttgactt 101
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 135 atttttctataaacttggtcaaagttagagaagtttgactt 175
>42622_sbi-MIR437w:mirbase
Length = 173
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 62 tttttctgaaaacttggtcaaagttagagaagtttgactt 101
||||||| |||||||||| |||||||||||||||||||||
Sbjct: 134 tttttctaaaaacttggtgaaagttagagaagtttgactt 173
>42614_sbi-MIR437o:mirbase
Length = 175
Score = 63.9 bits (32), Expect = 2e-11
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 50 tgttaatatatatttttctgaaaacttggtcaaagttagagaagtttgactt 101
||||||||||| ||||| | ||||||| ||||||||||||||||||||||||
Sbjct: 123 tgttaatatat-tttttataaaaacttagtcaaagttagagaagtttgactt 173
>42613_sbi-MIR437n:mirbase
Length = 182
Score = 63.9 bits (32), Expect = 2e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 58 tatatttttctgaaaacttggtcaaagttagagaagtttgactt 101
||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 137 tatatttttctacaaacttggttaaagttagagaagtttgactt 180
>42615_sbi-MIR437p:mirbase
Length = 188
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 71 aaacttggtcaaagttagagaagtttgactt 101
|||||||||||||||||||||||||||||||
Sbjct: 156 aaacttggtcaaagttagagaagtttgactt 186
>42607_sbi-MIR437g:mirbase
Length = 176
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 71 aaacttggtcaaagttagagaagtttgactt 101
|||||||||||||||||||||||||||||||
Sbjct: 144 aaacttggtcaaagttagagaagtttgactt 174
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 70 aaaacttggtcaaagttagagaagtttgact 100
||||||| |||||||||||| ||||||||||
Sbjct: 32 aaaacttagtcaaagttagaaaagtttgact 2
>42606_sbi-MIR437f:mirbase
Length = 174
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 71 aaacttggtcaaagttagagaagtttgactt 101
|||||||||||||||||||||||||||||||
Sbjct: 142 aaacttggtcaaagttagagaagtttgactt 172
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 79 tcaaagttagagaagtttgact 100
||||||||||||||||||||||
Sbjct: 22 tcaaagttagagaagtttgact 1
>42620_sbi-MIR437u:mirbase
Length = 164
Score = 60.0 bits (30), Expect = 3e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 60 tatttttctgaaaacttggtcaaagttagagaagtttgactt 101
||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 123 tatttttctataaacttggtgaaagttagagaagtttgactt 164
>42621_sbi-MIR437v:mirbase
Length = 114
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 61 atttttctgaaaacttggtcaaagttagagaagtttgactt 101
|||||||| |||||||| ||||||||||||||||||||||
Sbjct: 74 atttttctataaacttggacaaagttagagaagtttgactt 114
>42609_sbi-MIR437j:mirbase
Length = 172
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 71 aaacttggtcaaagttagagaagtttgac 99
|||||||||||||||||||||||||||||
Sbjct: 29 aaacttggtcaaagttagagaagtttgac 1
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 70 aaaacttggtcaaagttagagaagtttgactt 101
||||| ||||||||||||||||||||||||||
Sbjct: 141 aaaacatggtcaaagttagagaagtttgactt 172
>42608_sbi-MIR437i:mirbase
Length = 170
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 61 atttttctgaaaacttggtcaaagttagagaagtttgactt 101
|||||||| |||||| ||||||||||||||||||||||||
Sbjct: 130 atttttctataaactttgtcaaagttagagaagtttgactt 170
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 71 aaacttggtcaaagttagagaagtttgac 99
||||||||||||||||| |||||||||||
Sbjct: 29 aaacttggtcaaagttaaagaagtttgac 1
>42477_ssp-MIR437c:mirbase
Length = 177
Score = 58.0 bits (29), Expect = 1e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 57 atatatttttctgaaaacttggtcaaagttagagaagtttgactt 101
|||||||||||| ||| |||||||||||||||||||| ||||||
Sbjct: 133 atatatttttctaaaactttggtcaaagttagagaagtctgactt 177
>42612_sbi-MIR437m:mirbase
Length = 174
Score = 56.0 bits (28), Expect = 5e-09
Identities = 43/47 (91%), Gaps = 2/47 (4%)
Strand = Plus / Plus
Query: 57 atatatttttctgaaaacttggtcaaa--gttagagaagtttgactt 101
||||| |||||| |||||||||||||| ||||||||||||||||||
Sbjct: 126 atataattttctaaaaacttggtcaaaaagttagagaagtttgactt 172
>42617_sbi-MIR437r:mirbase
Length = 180
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 71 aaacttggtcaaagttagagaagtttgactt 101
|||||||| ||||||||||||||||||||||
Sbjct: 148 aaacttggccaaagttagagaagtttgactt 178
>42604_sbi-MIR437d:mirbase
Length = 136
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 71 aaacttggtcaaagttagagaagtttgactt 101
||||||||| |||||||||||||||||||||
Sbjct: 104 aaacttggttaaagttagagaagtttgactt 134
>42476_ssp-MIR437b:mirbase
Length = 172
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 57 atatatttttctgaaaacttggtcaaagttagagaagtttgac 99
|||||||||| | ||||||||||||||||||| |||||||||
Sbjct: 128 atatatttttgtataaacttggtcaaagttagacaagtttgac 170
>42618_sbi-MIR437s:mirbase
Length = 176
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 77 ggtcaaagttagagaagtttgactt 101
|||||||||||||||||||||||||
Sbjct: 150 ggtcaaagttagagaagtttgactt 174
Score = 40.1 bits (20), Expect = 3e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 62 tttttctgaaaacttggtcaaagttagagaagtttgactt 101
||||||| |||| ||| |||||||| |||||||||||||
Sbjct: 40 tttttctataaacctggacaaagttaaagaagtttgactt 1
>42601_sbi-MIR437a:mirbase
Length = 190
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 78 gtcaaagttagagaagtttgactt 101
||||||||||||||||||||||||
Sbjct: 165 gtcaaagttagagaagtttgactt 188
>42616_sbi-MIR437q:mirbase
Length = 160
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 75 ttggtcaaagttagagaagtttgactt 101
||||| |||||||||||||||||||||
Sbjct: 132 ttggtaaaagttagagaagtttgactt 158
>42603_sbi-MIR437c:mirbase
Length = 175
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 tcaaagttagagaagtttgactt 101
|||||||||||||||||||||||
Sbjct: 153 tcaaagttagagaagtttgactt 175
>41804_bdi-MIR437:mirbase
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 58 tatatttttctgaaaacttggtcaaagttagagaagtttgactt 101
||||||| ||| ||| |||||| || |||||||||||||||||
Sbjct: 70 tatatttgtctaaaagattggtcgaacttagagaagtttgactt 113
