miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42614_sbi-MIR437o:mirbase
Length = 175
Score = 347 bits (175), Expect = 2e-96
Identities = 175/175 (100%)
Strand = Plus / Plus
Query: 1 aagtcacttttataactttgcaaggtttttagaaaaatgcaccatcctctacaacatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcacttttataactttgcaaggtttttagaaaaatgcaccatcctctacaacatcaa 60
Query: 61 attagtttcattaaattctctatgaaatatgtcttggtagtgcatttatgtgaacctgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attagtttcattaaattctctatgaaatatgtcttggtagtgcatttatgtgaacctgta 120
Query: 121 gctgttaatatattttttataaaaacttagtcaaagttagagaagtttgacttag 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctgttaatatattttttataaaaacttagtcaaagttagagaagtttgacttag 175
>42475_ssp-MIR437a:mirbase
Length = 175
Score = 129 bits (65), Expect = 8e-31
Identities = 129/149 (86%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 25 gtttttagaaaaatgcaccatcctctacaacatcaaattagtttcattaaattctctatg 84
|||| ||||||||||||||| |||| || |||||| ||||| |||||||||||| |||
Sbjct: 28 gtttatagaaaaatgcaccaaaatctagaatatcaaactagttccattaaattctccatg 87
Query: 85 aaatatgtcttggtagtgcatttatgtgaacctgtagctgttaatatattttttataaaa 144
|||||| | ||| || ||||||||| ||||| ||||| || ||||||||||||| |||||
Sbjct: 88 aaatatattttgataatgcatttat-tgaacttgtagatgataatatattttttctaaaa 146
Query: 145 acttagtcaaagttagagaagtttgactt 173
|||| |||||||||||||||||||||||
Sbjct: 147 acttgatcaaagttagagaagtttgactt 175
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 134 tttttataaaaacttagtcaaagttagagaagtttgactt 173
||||| || |||||| ||||||||||||| |||||||||
Sbjct: 40 tttttctataaacttgatcaaagttagagaggtttgactt 1
>42607_sbi-MIR437g:mirbase
Length = 176
Score = 113 bits (57), Expect = 5e-26
Identities = 126/148 (85%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 25 gtttttagaaaaatgcaccatcctctacaacatcaaattagtttcattaaattctctatg 84
|||| ||||||| |||| || | |||||||||||||| |||||||| ||||||||||||
Sbjct: 147 gtttatagaaaattgcatcaacatctacaacatcaaactagtttcaccaaattctctatg 88
Query: 85 aaatatgtcttggtagtgcatttatgtgaacctgtagctgttaatatattttttataaaa 144
|||||||||||| |||||||||||| ||||| |||| || || |||||| | |||
Sbjct: 87 aaatatgtcttgatagtgcatttatttgaacttgtacacgtgaacatatttct--ctaaa 30
Query: 145 acttagtcaaagttagagaagtttgact 172
||||||||||||||||| ||||||||||
Sbjct: 29 acttagtcaaagttagaaaagtttgact 2
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 143 aaacttagtcaaagttagagaagtttgacttag 175
|||||| ||||||||||||||||||||||||||
Sbjct: 144 aaacttggtcaaagttagagaagtttgacttag 176
>42609_sbi-MIR437j:mirbase
Length = 172
Score = 91.7 bits (46), Expect = 2e-19
Identities = 104/122 (85%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 52 caacatcaaattagtttcattaaattctctatgaaatatgtcttggtagtgcatttatgt 111
|||| |||||| ||||||||| |||||| | ||||||||||||| ||| ||||||| |
Sbjct: 52 caacgtcaaatatgtttcattagattctccaagaaatatgtcttgatagcacatttattt 111
Query: 112 gaacctgtagctgttaatatattttttataaaaacttagtcaaagttagagaagtttgac 171
| || ||||| ||||||| |||||||| |||||| | ||||||||||||||||||||||
Sbjct: 112 gtacttgtagatgttaatgtatttttt-gaaaaacatggtcaaagttagagaagtttgac 170
Query: 172 tt 173
||
Sbjct: 171 tt 172
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 143 aaacttagtcaaagttagagaagtttgac 171
|||||| ||||||||||||||||||||||
Sbjct: 29 aaacttggtcaaagttagagaagtttgac 1
>42477_ssp-MIR437c:mirbase
Length = 177
Score = 87.7 bits (44), Expect = 3e-18
Identities = 93/108 (86%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 66 tttcattaaattctctatgaaatatgtcttggtagtgcatttatgtgaacctgtagctgt 125
|||||| |||||||| ||||||||| |||| |||||||||||| |||| ||||| |||
Sbjct: 71 tttcataaaattctccatgaaatatttcttaatagtgcatttattcgaacttgtagatgt 130
Query: 126 taatatattttttataaaaacttagtcaaagttagagaagtttgactt 173
||||||| ||||| ||||| || ||||||||||||||||| ||||||
Sbjct: 131 taatata-tttttctaaaactttggtcaaagttagagaagtctgactt 177
>42622_sbi-MIR437w:mirbase
Length = 173
Score = 85.7 bits (43), Expect = 1e-17
Identities = 126/152 (82%), Gaps = 5/152 (3%)
Strand = Plus / Plus
Query: 25 gtttttagaaaaatgcaccatcctctacaacatcaaattagtttcattaaattctctatg 84
|||| |||||||||||| || | | | ||||||||||||||| ||||||||||||| ||
Sbjct: 24 gtttatagaaaaatgcatcaacatttccaacatcaaattagtatcattaaattctccgtg 83
Query: 85 aaatatgtcttggtagtgcatttatgtgaacctgtagctgttaata---tattttttata 141
|||||| | | ||||||||||| ||||| ||||| | |||||| | |||||| ||
Sbjct: 84 aaatatat--tcatagtgcatttacttgaacttgtagattttaatagttttttttttcta 141
Query: 142 aaaacttagtcaaagttagagaagtttgactt 173
||||||| || |||||||||||||||||||||
Sbjct: 142 aaaacttggtgaaagttagagaagtttgactt 173
>42610_sbi-MIR437k:mirbase
Length = 172
Score = 83.8 bits (42), Expect = 4e-17
Identities = 88/102 (86%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 74 aattctctatgaaatatgtcttggtagtgcatttatgtgaacctgtagctgttaatatat 133
||||||| || ||||||||||| |||||||||||| |||| ||||| ||| | ||||
Sbjct: 72 aattctccataaaatatgtcttattagtgcatttatttgaatttgtagaagttgacatat 131
Query: 134 tttttataaaaacttagtcaaagttagagaagtttgacttag 175
|||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 132 ttttc-taaaaacttggtcaaagttagagaagtttgacttag 172
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 150 gtcaaagttagagaagtttgac 171
||||||||||||||||||||||
Sbjct: 24 gtcaaagttagagaagtttgac 3
>42612_sbi-MIR437m:mirbase
Length = 174
Score = 75.8 bits (38), Expect = 1e-14
Identities = 124/148 (83%), Gaps = 6/148 (4%)
Strand = Plus / Plus
Query: 30 tagaaaaatgcaccatcctctacaacatcaaattagtttcattaaattctctatgaaata 89
||||||||||||||| | |||| || |||||||||| ||||||||||| || | ||| |
Sbjct: 31 tagaaaaatgcaccaacatctagaatatcaaattagcttcattaaattttccacgaa--a 88
Query: 90 tgtcttggtagtgcatttatgtgaacctgtagctgttaatatattttttataaaaactta 149
||||||||||||| ||||| | ||| ||| |||||||||| |||| |||||||||
Sbjct: 89 tgtcttggtagtgtgtttat-taaactagtatatgttaatata-attttctaaaaacttg 146
Query: 150 gtc--aaagttagagaagtttgacttag 175
||| |||||||||||||||||||||||
Sbjct: 147 gtcaaaaagttagagaagtttgacttag 174
>42606_sbi-MIR437f:mirbase
Length = 174
Score = 75.8 bits (38), Expect = 1e-14
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 52 caacatcaaattagtttcattaaattctctatgaaatatgtcttggtagtgcatttatgt 111
||||| ||||||||||||||||||| | ||||||||||||||| |||||||||||| |
Sbjct: 121 caacaacaaattagtttcattaaatccaacatgaaatatgtcttgatagtgcatttattt 62
Query: 112 gaacctgtagctgttaatatattttt 137
| ||||| |||||||||||||||
Sbjct: 61 ggtattgtagatgttaatatattttt 36
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 143 aaacttagtcaaagttagagaagtttgacttag 175
|||||| ||||||||||||||||||||||||||
Sbjct: 142 aaacttggtcaaagttagagaagtttgacttag 174
>42631_sbi-MIR1435a:mirbase
Length = 287
Score = 73.8 bits (37), Expect = 4e-14
Identities = 93/112 (83%), Gaps = 6/112 (5%)
Strand = Plus / Minus
Query: 31 agaaaaatgcaccatcctctacaacatcaaattagtttcattaaattctctatgaaatat 90
||||| ||||| || | ||||||||||||| || |||||||||||| ||| |||||||||
Sbjct: 211 agaaagatgcatcaacatctacaacatcaagtttgtttcattaaatcctccatgaaatat 152
Query: 91 gt------cttggtagtgcatttatgtgaacctgtagctgttaatatatttt 136
|| |||||| ||||||||| ||||| ||||| ||||||||||||||
Sbjct: 151 gtttggtagttggtattgcatttatttgaacttgtagatgttaatatatttt 100
>42611_sbi-MIR437l:mirbase
Length = 170
Score = 63.9 bits (32), Expect = 4e-11
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 118 gtagctgttaatatattttttataaaaacttagtcaaagttagagaagtttgactt 173
|||| ||||||||||||||| ||||||||| | ||||||||||||||||||||||
Sbjct: 116 gtagatgttaatatatttttc-taaaaacttggccaaagttagagaagtttgactt 170
>42605_sbi-MIR437e:mirbase
Length = 101
Score = 63.9 bits (32), Expect = 4e-11
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 123 tgttaatatat-tttttataaaaacttagtcaaagttagagaagtttgactt 173
||||||||||| ||||| | ||||||| ||||||||||||||||||||||||
Sbjct: 50 tgttaatatatatttttctgaaaacttggtcaaagttagagaagtttgactt 101
>42063_osa-MIR437:mirbase
Length = 213
Score = 60.0 bits (30), Expect = 6e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 134 tttttataaaaacttagtcaaagttagagaagtttgacttag 175
||||| || |||||| ||||||||||||||||||||||||||
Sbjct: 136 tttttctataaacttggtcaaagttagagaagtttgacttag 177
>42615_sbi-MIR437p:mirbase
Length = 188
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 143 aaacttagtcaaagttagagaagtttgacttag 175
|||||| ||||||||||||||||||||||||||
Sbjct: 156 aaacttggtcaaagttagagaagtttgacttag 188
Score = 46.1 bits (23), Expect = 9e-06
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 50 tacaacatcaaattagtttcattaaattctctatgaaatatgtcttg 96
||||| |||||||||||||||| |||| | | ||||||| |||||||
Sbjct: 133 tacaaaatcaaattagtttcatcaaatccaccatgaaatttgtcttg 87
>42601_sbi-MIR437a:mirbase
Length = 190
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 147 ttagtcaaagttagagaagtttgacttag 175
|||||||||||||||||||||||||||||
Sbjct: 162 ttagtcaaagttagagaagtttgacttag 190
>42619_sbi-MIR437t:mirbase
Length = 170
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 134 tttttataaaaacttagtcaaagttagagaagtttgactt 173
||||| || |||||| ||||||||||||||||||||||||
Sbjct: 131 tttttctataaacttggtcaaagttagagaagtttgactt 170
>42608_sbi-MIR437i:mirbase
Length = 170
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 134 tttttataaaaacttagtcaaagttagagaagtttgactt 173
||||| || |||||| ||||||||||||||||||||||||
Sbjct: 131 tttttctataaactttgtcaaagttagagaagtttgactt 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 143 aaacttagtcaaagttagagaagtttgac 171
|||||| |||||||||| |||||||||||
Sbjct: 29 aaacttggtcaaagttaaagaagtttgac 1
Score = 42.1 bits (21), Expect = 1e-04
Identities = 43/49 (87%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 13 taactttg-caaggtttttagaaaaatgcaccatcctctacaacatcaa 60
|||||||| ||| |||| |||||||||||||||| |||||| ||||||
Sbjct: 156 taactttgacaaagtttatagaaaaatgcaccattatctacaccatcaa 108
>42602_sbi-MIR437b:mirbase
Length = 171
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 134 tttttataaaaacttagtcaaagttagagaagtttgactt 173
||||| || |||||| ||||||||||||||||||||||||
Sbjct: 132 tttttctataaacttggtcaaagttagagaagtttgactt 171
Score = 50.1 bits (25), Expect = 6e-07
Identities = 71/85 (83%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 25 gtttttagaaaaatgcaccatcctctacaacatcaaattagtttcattaaattctctatg 84
|||| ||||||||||||||| | ||| |||||||||||| |||||||| || | |||
Sbjct: 144 gtttatagaaaaatgcaccaacatctgaaacatcaaatta-tttcattacatctaccatg 86
Query: 85 aaatatgtcttggtagtgcatttat 109
|||||||||||| || ||| |||||
Sbjct: 85 aaatatgtcttgataatgcttttat 61
>42620_sbi-MIR437u:mirbase
Length = 164
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 54 acatcaaattagtttcattaaattctc 80
|||||||||||||||||||||||||||
Sbjct: 108 acatcaaattagtttcattaaattctc 82
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 134 tttttataaaaacttagtcaaagttagagaagtttgactt 173
||||| || |||||| || |||||||||||||||||||||
Sbjct: 125 tttttctataaacttggtgaaagttagagaagtttgactt 164
>42618_sbi-MIR437s:mirbase
Length = 176
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 150 gtcaaagttagagaagtttgacttag 175
||||||||||||||||||||||||||
Sbjct: 151 gtcaaagttagagaagtttgacttag 176
>42617_sbi-MIR437r:mirbase
Length = 180
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 143 aaacttagtcaaagttagagaagtttgacttag 175
|||||| | ||||||||||||||||||||||||
Sbjct: 148 aaacttggccaaagttagagaagtttgacttag 180
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 50 tacaacatcaaattagtttcattaaattc 78
||||||||||||||||||| ||| |||||
Sbjct: 52 tacaacatcaaattagttttattcaattc 80
>42613_sbi-MIR437n:mirbase
Length = 182
Score = 50.1 bits (25), Expect = 6e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 134 tttttataaaaacttagtcaaagttagagaagtttgactta 174
||||| || |||||| || ||||||||||||||||||||||
Sbjct: 141 tttttctacaaacttggttaaagttagagaagtttgactta 181
>42621_sbi-MIR437v:mirbase
Length = 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 134 tttttataaaaacttagtcaaagttagagaagtttgactt 173
||||| || |||||| | ||||||||||||||||||||||
Sbjct: 75 tttttctataaacttggacaaagttagagaagtttgactt 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 25 gtttttagaaaaatgcaccatcctctacaacatcaaattagtttcattaaattctctatg 84
|||| |||||||||||| || | ||||||| |||||| |||||||| |||| ||| |||
Sbjct: 87 gtttatagaaaaatgcatcaacatctacaatatcaaagcagtttcatcaaatgctccatg 28
Query: 85 a 85
|
Sbjct: 27 a 27
>42616_sbi-MIR437q:mirbase
Length = 160
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 aaagttagagaagtttgacttag 175
|||||||||||||||||||||||
Sbjct: 138 aaagttagagaagtttgacttag 160
>42604_sbi-MIR437d:mirbase
Length = 136
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 143 aaacttagtcaaagttagagaagtttgactt 173
|||||| || |||||||||||||||||||||
Sbjct: 104 aaacttggttaaagttagagaagtttgactt 134
>42603_sbi-MIR437c:mirbase
Length = 175
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 151 tcaaagttagagaagtttgactt 173
|||||||||||||||||||||||
Sbjct: 153 tcaaagttagagaagtttgactt 175
>42476_ssp-MIR437b:mirbase
Length = 172
Score = 46.1 bits (23), Expect = 9e-06
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 125 ttaatatattttttataaaaacttagtcaaagttagagaagtttgac 171
||||||||||||| || |||||| |||||||||||| |||||||||
Sbjct: 125 ttaatatatttttg-tataaacttggtcaaagttagacaagtttgac 170
