miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42617_sbi-MIR437r:mirbase
Length = 180
Score = 357 bits (180), Expect = 2e-99
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 1 agtaaaacttctcttattttgaccaagtctatagaaaaatgtactaatatttacaacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtaaaacttctcttattttgaccaagtctatagaaaaatgtactaatatttacaacatc 60
Query: 61 aaattagttttattcaattcaccatgcaatgtgttggagagtgaacttatttggtattac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaattagttttattcaattcaccatgcaatgtgttggagagtgaacttatttggtattac 120
Query: 121 agtataggtgccaatgtatatttctataaacttggccaaagttagagaagtttgacttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtataggtgccaatgtatatttctataaacttggccaaagttagagaagtttgacttag 180
>42607_sbi-MIR437g:mirbase
Length = 176
Score = 71.9 bits (36), Expect = 2e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 141 tttctataaacttggccaaagttagagaagtttgacttag 180
||||||||||||||| ||||||||||||||||||||||||
Sbjct: 137 tttctataaacttggtcaaagttagagaagtttgacttag 176
Score = 52.0 bits (26), Expect = 1e-07
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 5 aaacttctcttattttgaccaagtctatagaaaaatgtactaatatttacaacatcaaat 64
|||||||||| | ||||||||||| ||||||||| || | || || ||||||||||||
Sbjct: 169 aaacttctctaactttgaccaagtttatagaaaattgcatcaacatctacaacatcaaac 110
Query: 65 tagttt 70
||||||
Sbjct: 109 tagttt 104
>42606_sbi-MIR437f:mirbase
Length = 174
Score = 71.9 bits (36), Expect = 2e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 141 tttctataaacttggccaaagttagagaagtttgacttag 180
||||||||||||||| ||||||||||||||||||||||||
Sbjct: 135 tttctataaacttggtcaaagttagagaagtttgacttag 174
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 5 aaacttctcttattttgaccaagtctatagaaaa 38
|||||||||| | ||||||||||| |||||||||
Sbjct: 167 aaacttctctaactttgaccaagtttatagaaaa 134
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 157 caaagttagagaagtttgact 177
|||||||||||||||||||||
Sbjct: 21 caaagttagagaagtttgact 1
>42063_osa-MIR437:mirbase
Length = 213
Score = 71.9 bits (36), Expect = 2e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 141 tttctataaacttggccaaagttagagaagtttgacttag 180
||||||||||||||| ||||||||||||||||||||||||
Sbjct: 138 tttctataaacttggtcaaagttagagaagtttgacttag 177
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 5 aaacttctcttattttgaccaagtctatagaaaaat 40
|||||||||| | ||||||||||| |||||||||||
Sbjct: 170 aaacttctctaactttgaccaagtttatagaaaaat 135
>42621_sbi-MIR437v:mirbase
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 141 tttctataaacttggccaaagttagagaagtttgactt 178
||||||||||||||| ||||||||||||||||||||||
Sbjct: 77 tttctataaacttggacaaagttagagaagtttgactt 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 5 aaacttctcttattttgaccaagtctatagaaaaatg 41
|||||||||| | |||| |||||| ||||||||||||
Sbjct: 109 aaacttctctaactttgtccaagtttatagaaaaatg 73
>42619_sbi-MIR437t:mirbase
Length = 170
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 141 tttctataaacttggccaaagttagagaagtttgactt 178
||||||||||||||| ||||||||||||||||||||||
Sbjct: 133 tttctataaacttggtcaaagttagagaagtttgactt 170
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 5 aaacttctcttattttgaccaagtctatagaaaaatg 41
|||||||||| | ||||||||||| ||||||||||||
Sbjct: 165 aaacttctctaactttgaccaagtttatagaaaaatg 129
>42611_sbi-MIR437l:mirbase
Length = 170
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 141 tttctataaacttggccaaagttagagaagtttgactt 178
|||||| |||||||||||||||||||||||||||||||
Sbjct: 133 tttctaaaaacttggccaaagttagagaagtttgactt 170
>42602_sbi-MIR437b:mirbase
Length = 171
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 141 tttctataaacttggccaaagttagagaagtttgactt 178
||||||||||||||| ||||||||||||||||||||||
Sbjct: 134 tttctataaacttggtcaaagttagagaagtttgactt 171
Score = 52.0 bits (26), Expect = 1e-07
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 5 aaacttctcttattttgaccaagtctatagaaaaatgtactaatatttacaacatcaaat 64
|||||||||| | ||||||||||| |||||||||||| || || || | ||||||||||
Sbjct: 166 aaacttctctaactttgaccaagtttatagaaaaatgcaccaacatctgaaacatcaaat 107
Query: 65 ta 66
||
Sbjct: 106 ta 105
>42615_sbi-MIR437p:mirbase
Length = 188
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 141 tttctataaacttggccaaagttagagaagtttgacttag 180
|||| |||||||||| ||||||||||||||||||||||||
Sbjct: 149 tttcaataaacttggtcaaagttagagaagtttgacttag 188
>42610_sbi-MIR437k:mirbase
Length = 172
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 141 tttctataaacttggccaaagttagagaagtttgacttag 180
|||||| |||||||| ||||||||||||||||||||||||
Sbjct: 133 tttctaaaaacttggtcaaagttagagaagtttgacttag 172
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 135 tgtatatttctataaacttggccaaagttagagaagtttgac 176
||||| ||||||||| |||| ||||||||||||||||||||
Sbjct: 44 tgtatttttctataagtttggtcaaagttagagaagtttgac 3
Score = 40.1 bits (20), Expect = 6e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 5 aaacttctcttattttgaccaagtctatagaaaaat 40
|||||||||| | ||||||||||| | |||||||||
Sbjct: 165 aaacttctctaactttgaccaagtttttagaaaaat 130
>42609_sbi-MIR437j:mirbase
Length = 172
Score = 63.9 bits (32), Expect = 4e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 141 tttctataaacttggccaaagttagagaagtttgac 176
||||||||||||||| ||||||||||||||||||||
Sbjct: 36 tttctataaacttggtcaaagttagagaagtttgac 1
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 148 aaacttggccaaagttagagaagtttgactt 178
|||| ||| ||||||||||||||||||||||
Sbjct: 142 aaacatggtcaaagttagagaagtttgactt 172
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 5 aaacttctcttattttgaccaagtctatagaaaa 38
|||||||||| | ||||||||||| |||||||||
Sbjct: 4 aaacttctctaactttgaccaagtttatagaaaa 37
>42620_sbi-MIR437u:mirbase
Length = 164
Score = 61.9 bits (31), Expect = 2e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 136 gtatatttctataaacttggccaaagttagagaagtttgactt 178
|||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 122 gtatttttctataaacttggtgaaagttagagaagtttgactt 164
Score = 52.0 bits (26), Expect = 1e-07
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 5 aaacttctcttattttgaccaagtctatagaaaaatgtactaatatttacaacatcaaat 64
|||||||||| | ||| ||||||| ||||||||||| | ||||| || |||||||||
Sbjct: 159 aaacttctctaactttcaccaagtttatagaaaaatacgccaatatctatgacatcaaat 100
Query: 65 tagttttattcaattcaccatg 86
|||||| ||| ||||| |||||
Sbjct: 99 tagtttcattaaattctccatg 78
>42604_sbi-MIR437d:mirbase
Length = 136
Score = 61.9 bits (31), Expect = 2e-10
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 5 aaacttctcttattttgaccaagtctatagaaaaatgtactaatatttacaacatcaaat 64
|||||||||| | ||| ||||||| ||||| |||||| || |||||||||||||||| ||
Sbjct: 129 aaacttctctaactttaaccaagtttataggaaaatgcaccaatatttacaacatcacat 70
Query: 65 tag 67
|||
Sbjct: 69 tag 67
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 144 ctataaacttggccaaagttagagaagtttgactt 178
|||||||||||| |||||||||||||||||||||
Sbjct: 100 ctataaacttggttaaagttagagaagtttgactt 134
>42608_sbi-MIR437i:mirbase
Length = 170
Score = 60.0 bits (30), Expect = 6e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 141 tttctataaacttggccaaagttagagaagtttgactt 178
||||||||||||| | ||||||||||||||||||||||
Sbjct: 133 tttctataaactttgtcaaagttagagaagtttgactt 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 141 tttctataaacttggccaaagttagagaagtttgac 176
|||||| |||||||| |||||||| |||||||||||
Sbjct: 36 tttctagaaacttggtcaaagttaaagaagtttgac 1
Score = 46.1 bits (23), Expect = 9e-06
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 5 aaacttctcttattttgaccaagtctatagaaaaatgtactaatatttacaacatcaaat 64
|||||||||| | |||||| |||| |||||||||||| || | ||| |||| |||| |||
Sbjct: 165 aaacttctctaactttgacaaagtttatagaaaaatgcaccattatctacaccatc-aat 107
Query: 65 tagtttt 71
|||||||
Sbjct: 106 tagtttt 100
>42613_sbi-MIR437n:mirbase
Length = 182
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 141 tttctataaacttggccaaagttagagaagtttgactta 179
|||||| |||||||| ||||||||||||||||||||||
Sbjct: 143 tttctacaaacttggttaaagttagagaagtttgactta 181
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 141 tttctataaacttggccaaagttagaga 168
||||||||||||||| ||||||| ||||
Sbjct: 38 tttctataaacttggtcaaagttggaga 11
>42605_sbi-MIR437e:mirbase
Length = 101
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 148 aaacttggccaaagttagagaagtttgactt 178
|||||||| ||||||||||||||||||||||
Sbjct: 71 aaacttggtcaaagttagagaagtttgactt 101
>42622_sbi-MIR437w:mirbase
Length = 173
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 141 tttctataaacttggccaaagttagagaagtttgactt 178
|||||| |||||||| |||||||||||||||||||||
Sbjct: 136 tttctaaaaacttggtgaaagttagagaagtttgactt 173
Score = 46.1 bits (23), Expect = 9e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 22 accaagtctatagaaaaatgtactaatatttacaacatcaaattagt 68
||||||| |||||||||||| | || |||| |||||||||||||||
Sbjct: 19 accaagtttatagaaaaatgcatcaacatttccaacatcaaattagt 65
>42618_sbi-MIR437s:mirbase
Length = 176
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 141 tttctataaacttggccaaagttagagaagtttgactt 178
||||||||||| ||| |||||||| |||||||||||||
Sbjct: 38 tttctataaacctggacaaagttaaagaagtttgactt 1
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 157 caaagttagagaagtttgacttag 180
||||||||||||||||||||||||
Sbjct: 153 caaagttagagaagtttgacttag 176
>42475_ssp-MIR437a:mirbase
Length = 175
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 141 tttctataaacttggccaaagttagagaagtttgactt 178
|||||||||||||| |||||||||||| |||||||||
Sbjct: 38 tttctataaacttgatcaaagttagagaggtttgactt 1
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 141 tttctataaacttggccaaagttagagaagtttgactt 178
|||||| ||||||| ||||||||||||||||||||||
Sbjct: 138 tttctaaaaacttgatcaaagttagagaagtttgactt 175
>42614_sbi-MIR437o:mirbase
Length = 175
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 148 aaacttggccaaagttagagaagtttgacttag 180
|||||| | ||||||||||||||||||||||||
Sbjct: 143 aaacttagtcaaagttagagaagtttgacttag 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 52 tacaacatcaaattagttttattcaattc 80
||||||||||||||||||| ||| |||||
Sbjct: 50 tacaacatcaaattagtttcattaaattc 78
>41838_bdi-MIR5169:mirbase
Length = 210
Score = 50.1 bits (25), Expect = 6e-07
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 18 tttgaccaagtctatagaaaaatgtactaatatttacaacatcaaattagttttatt 74
||||||||||| ||||||||||| ||| || || |||||| ||||||||||||||
Sbjct: 177 tttgaccaagtttatagaaaaatataccaacatctacaactctaaattagttttatt 121
>42616_sbi-MIR437q:mirbase
Length = 160
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 141 tttctataaacttggccaaagttagagaagtttgacttag 180
|||||||| | |||| |||||||||||||||||||||||
Sbjct: 121 tttctatagagttggtaaaagttagagaagtttgacttag 160
>42601_sbi-MIR437a:mirbase
Length = 190
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 157 caaagttagagaagtttgacttag 180
||||||||||||||||||||||||
Sbjct: 167 caaagttagagaagtttgacttag 190
>42476_ssp-MIR437b:mirbase
Length = 172
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 145 tataaacttggccaaagttagagaagtttgac 176
||||||||||| |||||||||| |||||||||
Sbjct: 139 tataaacttggtcaaagttagacaagtttgac 170
Score = 40.1 bits (20), Expect = 6e-04
Identities = 50/60 (83%)
Strand = Plus / Minus
Query: 5 aaacttctcttattttgaccaagtctatagaaaaatgtactaatatttacaacatcaaat 64
|||||| ||| | ||||||||||| |||| |||||| || |||||| | ||| |||||||
Sbjct: 167 aaacttgtctaactttgaccaagtttatacaaaaatatattaatatctgcaatatcaaat 108
>42612_sbi-MIR437m:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 158 aaagttagagaagtttgacttag 180
|||||||||||||||||||||||
Sbjct: 152 aaagttagagaagtttgacttag 174
>42603_sbi-MIR437c:mirbase
Length = 175
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 caaagttagagaagtttgactt 178
||||||||||||||||||||||
Sbjct: 154 caaagttagagaagtttgactt 175
