miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42618_sbi-MIR437s:mirbase
Length = 176
Score = 349 bits (176), Expect = 4e-97
Identities = 176/176 (100%)
Strand = Plus / Plus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaacactcaaacatctagaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaacactcaaacatctagaatat 60
Query: 61 cagatgagtttcattagattctttatgcaatatattttgatagagaatttatttgaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagatgagtttcattagattctttatgcaatatattttgatagagaatttatttgaactt 120
Query: 121 gtaaatgtcagtatattttctaaaagcacggtcaaagttagagaagtttgacttag 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtaaatgtcagtatattttctaaaagcacggtcaaagttagagaagtttgacttag 176
>42475_ssp-MIR437a:mirbase
Length = 175
Score = 81.8 bits (41), Expect = 2e-16
Identities = 144/176 (81%), Gaps = 3/176 (1%)
Strand = Plus / Plus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaacactcaaacatctagaatat 60
||||||||| ||| |||||||| || ||||||||||||| | | || |||||||||||
Sbjct: 1 aagtcaaacctctctaactttgatcaagtttatagaaaaatgcaccaaaatctagaatat 60
Query: 61 cagatgagtttcattagattctttatgcaatatattttgatagagaatttatttgaactt 120
|| | |||| ||||| ||||| ||| |||||||||||||| | ||||||| ||||||
Sbjct: 61 caaactagttccattaaattctccatgaaatatattttgataatgcatttatt-gaactt 119
Query: 121 gtaaatgtcagtatatttt--ctaaaagcacggtcaaagttagagaagtttgactt 174
||| ||| | |||||||| |||||| | | |||||||||||||||||||||||
Sbjct: 120 gtagatgataatatattttttctaaaaacttgatcaaagttagagaagtttgactt 175
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| || |||| ||||||||
Sbjct: 175 aagtcaaacttctctaactttgatcaagtttttagaaaaa 136
>42621_sbi-MIR437v:mirbase
Length = 114
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||||||| |||||||||||||
Sbjct: 114 aagtcaaacttctctaactttgtccaagtttatagaaaaa 75
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 153 caaagttagagaagtttgactt 174
||||||||||||||||||||||
Sbjct: 93 caaagttagagaagtttgactt 114
>42609_sbi-MIR437j:mirbase
Length = 172
Score = 63.9 bits (32), Expect = 4e-11
Identities = 90/108 (83%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 68 gtttcattagattctttatgcaatatattttgatagagaatttatttgaacttgtaaatg 127
||||||||||||||| | | ||||| | ||||||| ||||||||| ||||||| |||
Sbjct: 65 gtttcattagattctccaagaaatatgtcttgatagcacatttatttgtacttgtagatg 124
Query: 128 tcagtatattttct-aaaagcacggtcaaagttagagaagtttgactt 174
| | | |||||| | |||| || |||||||||||||||||||||||||
Sbjct: 125 ttaatgtattttttgaaaaacatggtcaaagttagagaagtttgactt 172
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 3 gtcaaacttctttaactttgtccaggtttatagaaaa 39
||||||||||| |||||||| ||| ||||||||||||
Sbjct: 1 gtcaaacttctctaactttgaccaagtttatagaaaa 37
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 150 ggtcaaagttagagaagtttgac 172
|||||||||||||||||||||||
Sbjct: 23 ggtcaaagttagagaagtttgac 1
>42607_sbi-MIR437g:mirbase
Length = 176
Score = 61.9 bits (31), Expect = 1e-10
Identities = 100/123 (81%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaacactcaaacatctagaatat 60
||||||||||||| |||||||| ||| |||||||||||| | |||||||| || ||
Sbjct: 174 aagtcaaacttctctaactttgaccaagtttatagaaaattgcatcaacatctacaacat 115
Query: 61 cagatgagtttcattagattctttatgcaatatattttgatagagaatttatttgaactt 120
|| | ||||||| | ||||| |||| ||||| | ||||||| | ||||||||||||||
Sbjct: 114 caaactagtttcaccaaattctctatgaaatatgtcttgatagtgcatttatttgaactt 55
Query: 121 gta 123
|||
Sbjct: 54 gta 52
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgacttag 176
|||||||||||||||||||||||||||
Sbjct: 150 ggtcaaagttagagaagtttgacttag 176
>42619_sbi-MIR437t:mirbase
Length = 170
Score = 58.0 bits (29), Expect = 2e-09
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaacactcaaacatct 53
||||||||||||| |||||||| ||| ||||||||||||| | |||||||||
Sbjct: 170 aagtcaaacttctctaactttgaccaagtttatagaaaaatgcacaaacatct 118
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgactt 174
|||||||||||||||||||||||||
Sbjct: 146 ggtcaaagttagagaagtttgactt 170
>42610_sbi-MIR437k:mirbase
Length = 172
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 136 ttttctaaaagcacggtcaaagttagagaagtttgacttag 176
|||||||||| | |||||||||||||||||||||||||||
Sbjct: 132 ttttctaaaaacttggtcaaagttagagaagtttgacttag 172
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||| ||||||||
Sbjct: 170 aagtcaaacttctctaactttgaccaagtttttagaaaaa 131
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 150 ggtcaaagttagagaagtttgac 172
|||||||||||||||||||||||
Sbjct: 25 ggtcaaagttagagaagtttgac 3
>42602_sbi-MIR437b:mirbase
Length = 171
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||||||||||||
Sbjct: 171 aagtcaaacttctctaactttgaccaagtttatagaaaaa 132
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgactt 174
|||||||||||||||||||||||||
Sbjct: 147 ggtcaaagttagagaagtttgactt 171
>42063_osa-MIR437:mirbase
Length = 213
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||||||||||||
Sbjct: 175 aagtcaaacttctctaactttgaccaagtttatagaaaaa 136
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgacttag 176
|||||||||||||||||||||||||||
Sbjct: 151 ggtcaaagttagagaagtttgacttag 177
>42631_sbi-MIR1435a:mirbase
Length = 287
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 107 atttatttgaacttgtaaatgtcagtatattttctaaaa 145
||||||||||||||||| |||| | ||||||||||||||
Sbjct: 132 atttatttgaacttgtagatgttaatatattttctaaaa 94
>42615_sbi-MIR437p:mirbase
Length = 188
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgacttag 176
|||||||||||||||||||||||||||
Sbjct: 162 ggtcaaagttagagaagtttgacttag 188
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||||| ||||||
Sbjct: 186 aagtcaaacttctctaactttgaccaagtttattgaaaaa 147
>42606_sbi-MIR437f:mirbase
Length = 174
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaa 39
||||||||||||| |||||||| ||| ||||||||||||
Sbjct: 172 aagtcaaacttctctaactttgaccaagtttatagaaaa 134
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgacttag 176
|||||||||||||||||||||||||||
Sbjct: 148 ggtcaaagttagagaagtttgacttag 174
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 152 tcaaagttagagaagtttgact 173
||||||||||||||||||||||
Sbjct: 22 tcaaagttagagaagtttgact 1
>42620_sbi-MIR437u:mirbase
Length = 164
Score = 52.0 bits (26), Expect = 1e-07
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaacactcaaacatctagaatat 60
||||||||||||| ||||||| ||| ||||||||||||| || | || ||||| | ||
Sbjct: 164 aagtcaaacttctctaactttcaccaagtttatagaaaaatacgccaatatctatgacat 105
Query: 61 cagatgagtttcattagattct 82
|| || |||||||||| |||||
Sbjct: 104 caaattagtttcattaaattct 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 aaagttagagaagtttgactt 174
|||||||||||||||||||||
Sbjct: 144 aaagttagagaagtttgactt 164
>42617_sbi-MIR437r:mirbase
Length = 180
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaa 38
||||||||||||| |||||||| ||| |||||||||||
Sbjct: 178 aagtcaaacttctctaactttggccaagtttatagaaa 141
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 153 caaagttagagaagtttgacttag 176
||||||||||||||||||||||||
Sbjct: 157 caaagttagagaagtttgacttag 180
>42614_sbi-MIR437o:mirbase
Length = 175
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 151 gtcaaagttagagaagtttgacttag 176
||||||||||||||||||||||||||
Sbjct: 150 gtcaaagttagagaagtttgacttag 175
>42601_sbi-MIR437a:mirbase
Length = 190
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 151 gtcaaagttagagaagtttgacttag 176
||||||||||||||||||||||||||
Sbjct: 165 gtcaaagttagagaagtttgacttag 190
>42605_sbi-MIR437e:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgactt 174
|||||||||||||||||||||||||
Sbjct: 77 ggtcaaagttagagaagtttgactt 101
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||| |||||||
Sbjct: 101 aagtcaaacttctctaactttgaccaagttttcagaaaaa 62
>42477_ssp-MIR437c:mirbase
Length = 177
Score = 50.1 bits (25), Expect = 6e-07
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 107 atttatttgaacttgtaaatgtcagtatatttt-ctaaaagcacggtcaaagttagagaa 165
||||||| ||||||||| |||| | |||||||| |||||| ||||||||||||||||
Sbjct: 109 atttattcgaacttgtagatgttaatatatttttctaaaactttggtcaaagttagagaa 168
Query: 166 gtttgactt 174
|| ||||||
Sbjct: 169 gtctgactt 177
>42611_sbi-MIR437l:mirbase
Length = 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||| ||||||||
Sbjct: 170 aagtcaaacttctctaactttggccaagtttttagaaaaa 131
Score = 46.1 bits (23), Expect = 9e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 136 ttttctaaaagcacggtcaaagttagagaagtttgactt 174
|||||||||| | || ||||||||||||||||||||||
Sbjct: 132 ttttctaaaaacttggccaaagttagagaagtttgactt 170
>42608_sbi-MIR437i:mirbase
Length = 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 3 gtcaaacttctttaactttgtccaggtttatagaaa 38
|||||||||||||||||||| ||| |||| ||||||
Sbjct: 1 gtcaaacttctttaactttgaccaagtttctagaaa 36
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| | | |||||||||||||
Sbjct: 170 aagtcaaacttctctaactttgacaaagtttatagaaaaa 131
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 151 gtcaaagttagagaagtttgactt 174
||||||||||||||||||||||||
Sbjct: 147 gtcaaagttagagaagtttgactt 170
>42622_sbi-MIR437w:mirbase
Length = 173
Score = 46.1 bits (23), Expect = 9e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 136 ttttctaaaagcacggtcaaagttagagaagtttgactt 174
|||||||||| | ||| |||||||||||||||||||||
Sbjct: 135 ttttctaaaaacttggtgaaagttagagaagtttgactt 173
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| ||||||| ||| |||| ||||||||
Sbjct: 173 aagtcaaacttctctaactttcaccaagtttttagaaaaa 134
>42616_sbi-MIR437q:mirbase
Length = 160
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 aaagttagagaagtttgacttag 176
|||||||||||||||||||||||
Sbjct: 138 aaagttagagaagtttgacttag 160
>42612_sbi-MIR437m:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 aaagttagagaagtttgacttag 176
|||||||||||||||||||||||
Sbjct: 152 aaagttagagaagtttgacttag 174
>42603_sbi-MIR437c:mirbase
Length = 175
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 152 tcaaagttagagaagtttgactt 174
|||||||||||||||||||||||
Sbjct: 153 tcaaagttagagaagtttgactt 175
>42613_sbi-MIR437n:mirbase
Length = 182
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 154 aaagttagagaagtttgactta 175
||||||||||||||||||||||
Sbjct: 160 aaagttagagaagtttgactta 181
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| ||||||| ||| |||| ||||||||
Sbjct: 180 aagtcaaacttctctaactttaaccaagtttgtagaaaaa 141
>42604_sbi-MIR437d:mirbase
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 aaagttagagaagtttgactt 174
|||||||||||||||||||||
Sbjct: 114 aaagttagagaagtttgactt 134
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| ||||||| ||| |||||||| ||||
Sbjct: 134 aagtcaaacttctctaactttaaccaagtttataggaaaa 95
