miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42619_sbi-MIR437t:mirbase
Length = 170
Score = 337 bits (170), Expect = 2e-93
Identities = 170/170 (100%)
Strand = Plus / Plus
Query: 1 gtcaaacttgtctatctttgaccaagttgaaaaatatattaacatctacaatatcaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcaaacttgtctatctttgaccaagttgaaaaatatattaacatctacaatatcaaatg 60
Query: 61 aatccactatcgaaatattatttcctggtgtgtgcaatgaatatagtttgatgtagcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatccactatcgaaatattatttcctggtgtgtgcaatgaatatagtttgatgtagcaga 120
Query: 121 tgtttgtgcatttttctataaacttggtcaaagttagagaagtttgactt 170
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtttgtgcatttttctataaacttggtcaaagttagagaagtttgactt 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 141 aacttggtcaaagttagagaagtttgac 168
||||||||||||| |||| |||||||||
Sbjct: 28 aacttggtcaaagatagacaagtttgac 1
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 gtcaaacttgtctatctttgaccaagtt 28
||||||||| |||| |||||||||||||
Sbjct: 168 gtcaaacttctctaactttgaccaagtt 141
>42602_sbi-MIR437b:mirbase
Length = 171
Score = 103 bits (52), Expect = 4e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 107 tttgatgtagcagatgtttgtgcatttttctataaacttggtcaaagttagagaagtttg 166
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tttgatgtttcagatgttggtgcatttttctataaacttggtcaaagttagagaagtttg 167
Query: 167 actt 170
||||
Sbjct: 168 actt 171
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 gtcaaacttgtctatctttgaccaagtt 28
||||||||| |||| |||||||||||||
Sbjct: 169 gtcaaacttctctaactttgaccaagtt 142
>42607_sbi-MIR437g:mirbase
Length = 176
Score = 93.7 bits (47), Expect = 4e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 104 tagtttgatgtagcagatgtttgtgcatttttctataaacttggtcaaagttagagaagt 163
||||||||||| | ||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 108 tagtttgatgttgtagatgttgatgcaattttctataaacttggtcaaagttagagaagt 167
Query: 164 ttgactt 170
|||||||
Sbjct: 168 ttgactt 174
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 140 aaacttggtcaaagttagagaagtttgact 169
|||||| |||||||||||| ||||||||||
Sbjct: 31 aaacttagtcaaagttagaaaagtttgact 2
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 gtcaaacttgtctatctttgaccaagtt 28
||||||||| |||| |||||||||||||
Sbjct: 172 gtcaaacttctctaactttgaccaagtt 145
>42621_sbi-MIR437v:mirbase
Length = 114
Score = 81.8 bits (41), Expect = 2e-16
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 118 agatgtttgtgcatttttctataaacttggtcaaagttagagaagtttgactt 170
||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 62 agatgttgatgcatttttctataaacttggacaaagttagagaagtttgactt 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 52/62 (83%), Gaps = 4/62 (6%)
Strand = Plus / Minus
Query: 1 gtcaaacttgtctatctttgaccaagtt----gaaaaatatattaacatctacaatatca 56
||||||||| |||| ||||| ||||||| ||||||| || ||||||||||||||||
Sbjct: 112 gtcaaacttctctaactttgtccaagtttatagaaaaatgcatcaacatctacaatatca 53
Query: 57 aa 58
||
Sbjct: 52 aa 51
>42608_sbi-MIR437i:mirbase
Length = 170
Score = 81.8 bits (41), Expect = 2e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 126 gtgcatttttctataaacttggtcaaagttagagaagtttgactt 170
|||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 126 gtgcatttttctataaactttgtcaaagttagagaagtttgactt 170
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 133 tttctataaacttggtcaaagttagagaagtttgac 168
|||||| ||||||||||||||||| |||||||||||
Sbjct: 36 tttctagaaacttggtcaaagttaaagaagtttgac 1
>42606_sbi-MIR437f:mirbase
Length = 174
Score = 81.8 bits (41), Expect = 2e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 126 gtgcatttttctataaacttggtcaaagttagagaagtttgactt 170
||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gtgcacttttctataaacttggtcaaagttagagaagtttgactt 172
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 148 tcaaagttagagaagtttgact 169
||||||||||||||||||||||
Sbjct: 22 tcaaagttagagaagtttgact 1
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 gtcaaacttgtctatctttgaccaagtt 28
||||||||| |||| |||||||||||||
Sbjct: 170 gtcaaacttctctaactttgaccaagtt 143
>42063_osa-MIR437:mirbase
Length = 213
Score = 81.8 bits (41), Expect = 2e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 130 atttttctataaacttggtcaaagttagagaagtttgactt 170
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 atttttctataaacttggtcaaagttagagaagtttgactt 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 130 atttttctataaacttggtcaaagttagagaagtttgactt 170
||||| ||| ||||||||||||||| | |||| ||||||||
Sbjct: 80 attttactacaaacttggtcaaagtaaaagaattttgactt 40
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 gtcaaacttgtctatctttgaccaagtt 28
||||||||| |||| |||||||||||||
Sbjct: 173 gtcaaacttctctaactttgaccaagtt 146
>42476_ssp-MIR437b:mirbase
Length = 172
Score = 75.8 bits (38), Expect = 1e-14
Identities = 116/139 (83%), Gaps = 6/139 (4%)
Strand = Plus / Minus
Query: 1 gtcaaacttgtctatctttgaccaagtt----gaaaaatatattaacatctacaatatca 56
|||||||||||||| ||||||||||||| ||||||||||||| |||| ||||||||
Sbjct: 170 gtcaaacttgtctaactttgaccaagtttatacaaaaatatattaatatctgcaatatca 111
Query: 57 aatgaatccactatcgaaatattatttcctggtgtgtgcaatgaatatagtttgatgtag 116
||| ||| ||||||| || || |||||| || ||| | ||| ||| ||||||||||| |
Sbjct: 110 aataaatgcactatcaaagta-tatttcatgatgtatctaataaatgtagtttgatgttg 52
Query: 117 cagatgtttgtgcattttt 135
|||||||||||||||||
Sbjct: 51 -tgatgtttgtgcattttt 34
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 130 atttttctataaacttggtcaaagttagagaagtttgac 168
|||||| |||||||||||||||||||||| |||||||||
Sbjct: 132 atttttgtataaacttggtcaaagttagacaagtttgac 170
>42620_sbi-MIR437u:mirbase
Length = 164
Score = 73.8 bits (37), Expect = 4e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 130 atttttctataaacttggtcaaagttagagaagtttgactt 170
||||||||||||||||||| |||||||||||||||||||||
Sbjct: 124 atttttctataaacttggtgaaagttagagaagtttgactt 164
>42610_sbi-MIR437k:mirbase
Length = 172
Score = 73.8 bits (37), Expect = 4e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 130 atttttctataaacttggtcaaagttagagaagtttgactt 170
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 130 atttttctaaaaacttggtcaaagttagagaagtttgactt 170
Score = 63.9 bits (32), Expect = 4e-11
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 121 tgtttgtgcatttttctataaacttggtcaaagttagagaagtttgac 168
|||| ||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 50 tgttggtgtatttttctataagtttggtcaaagttagagaagtttgac 3
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 gtcaaacttgtctatctttgaccaagtt 28
||||||||| |||| |||||||||||||
Sbjct: 168 gtcaaacttctctaactttgaccaagtt 141
>42609_sbi-MIR437j:mirbase
Length = 172
Score = 73.8 bits (37), Expect = 4e-14
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 132 ttttctataaacttggtcaaagttagagaagtttgac 168
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 ttttctataaacttggtcaaagttagagaagtttgac 1
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 140 aaacttggtcaaagttagagaagtttgactt 170
|||| ||||||||||||||||||||||||||
Sbjct: 142 aaacatggtcaaagttagagaagtttgactt 172
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 gtcaaacttgtctatctttgaccaagtt 28
||||||||| |||| |||||||||||||
Sbjct: 1 gtcaaacttctctaactttgaccaagtt 28
>42604_sbi-MIR437d:mirbase
Length = 136
Score = 73.8 bits (37), Expect = 4e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 126 gtgcatttttctataaacttggtcaaagttagagaagtttgactt 170
||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 90 gtgcattttcctataaacttggttaaagttagagaagtttgactt 134
>42475_ssp-MIR437a:mirbase
Length = 175
Score = 73.8 bits (37), Expect = 4e-14
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 126 gtgcatttttctataaacttggtcaaagttagagaagtttgactt 170
||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 45 gtgcatttttctataaacttgatcaaagttagagaggtttgactt 1
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 131 tttttctataaacttggtcaaagttagagaagtttgactt 170
|||||||| ||||||| |||||||||||||||||||||||
Sbjct: 136 tttttctaaaaacttgatcaaagttagagaagtttgactt 175
>42615_sbi-MIR437p:mirbase
Length = 188
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 131 tttttctataaacttggtcaaagttagagaagtttgactt 170
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 147 tttttcaataaacttggtcaaagttagagaagtttgactt 186
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 gtcaaacttgtctatctttgaccaagtt 28
||||||||| |||| |||||||||||||
Sbjct: 184 gtcaaacttctctaactttgaccaagtt 157
>42617_sbi-MIR437r:mirbase
Length = 180
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 133 tttctataaacttggtcaaagttagagaagtttgactt 170
||||||||||||||| ||||||||||||||||||||||
Sbjct: 141 tttctataaacttggccaaagttagagaagtttgactt 178
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 129 catttttctataaacttggtcaaagttagagaagttt 165
|||||||||||| ||||||||||| | ||||||||||
Sbjct: 41 catttttctatagacttggtcaaaataagagaagttt 5
>42613_sbi-MIR437n:mirbase
Length = 182
Score = 65.9 bits (33), Expect = 9e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 130 atttttctataaacttggtcaaagttagagaagtttgactt 170
||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 140 atttttctacaaacttggttaaagttagagaagtttgactt 180
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 132 ttttctataaacttggtcaaagttagaga 160
|||||||||||||||||||||||| ||||
Sbjct: 39 ttttctataaacttggtcaaagttggaga 11
>42611_sbi-MIR437l:mirbase
Length = 170
Score = 65.9 bits (33), Expect = 9e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 130 atttttctataaacttggtcaaagttagagaagtttgactt 170
||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 130 atttttctaaaaacttggccaaagttagagaagtttgactt 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 121 tgtttgtgcatttttctataaacttggtcaaagtta 156
|||| ||||||||||||||||| |||||||| ||||
Sbjct: 48 tgttggtgcatttttctataaatttggtcaatgtta 13
Score = 48.1 bits (24), Expect = 2e-06
Identities = 46/53 (86%), Gaps = 4/53 (7%)
Strand = Plus / Minus
Query: 1 gtcaaacttgtctatctttgaccaagtt----gaaaaatatattaacatctac 49
||||||||| |||| ||||| ||||||| |||||||||||||||||||||
Sbjct: 168 gtcaaacttctctaactttggccaagtttttagaaaaatatattaacatctac 116
>42605_sbi-MIR437e:mirbase
Length = 101
Score = 65.9 bits (33), Expect = 9e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 130 atttttctataaacttggtcaaagttagagaagtttgactt 170
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 atttttctgaaaacttggtcaaagttagagaagtttgactt 101
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 gtcaaacttgtctatctttgaccaagtt 28
||||||||| |||| |||||||||||||
Sbjct: 99 gtcaaacttctctaactttgaccaagtt 72
>42622_sbi-MIR437w:mirbase
Length = 173
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 131 tttttctataaacttggtcaaagttagagaagtttgactt 170
|||||||| ||||||||| |||||||||||||||||||||
Sbjct: 134 tttttctaaaaacttggtgaaagttagagaagtttgactt 173
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 127 tgcatttttctataaacttggt 148
||||||||||||||||||||||
Sbjct: 40 tgcatttttctataaacttggt 19
>42618_sbi-MIR437s:mirbase
Length = 176
Score = 58.0 bits (29), Expect = 2e-09
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 118 agatgtttgtgcatttttctataaacttggtcaaagttagagaagtttgactt 170
||||||||| | ||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 53 agatgtttgagtgtttttctataaacctggacaaagttaaagaagtttgactt 1
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 146 ggtcaaagttagagaagtttgactt 170
|||||||||||||||||||||||||
Sbjct: 150 ggtcaaagttagagaagtttgactt 174
>42614_sbi-MIR437o:mirbase
Length = 175
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 131 tttttctataaacttggtcaaagttagagaagtttgactt 170
||||| || |||||| ||||||||||||||||||||||||
Sbjct: 134 tttttataaaaacttagtcaaagttagagaagtttgactt 173
>42616_sbi-MIR437q:mirbase
Length = 160
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 133 tttctataaacttggtcaaagttagagaagtttgactt 170
|||||||| | ||||| |||||||||||||||||||||
Sbjct: 121 tttctatagagttggtaaaagttagagaagtttgactt 158
>42612_sbi-MIR437m:mirbase
Length = 174
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/41 (92%), Gaps = 2/41 (4%)
Strand = Plus / Plus
Query: 132 ttttctataaacttggtcaaa--gttagagaagtttgactt 170
||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 132 ttttctaaaaacttggtcaaaaagttagagaagtttgactt 172
Score = 46.1 bits (23), Expect = 9e-06
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 118 agatgtttgtgcatttttctataaacttggtcaaagttagagaagtttgac 168
||||||| ||||||||||||| |||||| | ||||||||| ||||||||
Sbjct: 51 agatgttggtgcatttttctagtaacttgtttaaagttagatgagtttgac 1
>42477_ssp-MIR437c:mirbase
Length = 177
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 130 atttttctataaacttggtcaaagttagagaagtttgactt 170
||||||||| || |||||||||||||||||||| ||||||
Sbjct: 137 atttttctaaaactttggtcaaagttagagaagtctgactt 177
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 29 gaaaaatatattaacatctacaa 51
|||||||||||||||||||||||
Sbjct: 143 gaaaaatatattaacatctacaa 121
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 29 gaaaaatatattaacatctacaatatcaa 57
||||||| ||| |||||||||||||||||
Sbjct: 36 gaaaaatgtatcaacatctacaatatcaa 64
>42601_sbi-MIR437a:mirbase
Length = 190
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 147 gtcaaagttagagaagtttgactt 170
||||||||||||||||||||||||
Sbjct: 165 gtcaaagttagagaagtttgactt 188
>42603_sbi-MIR437c:mirbase
Length = 175
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 148 tcaaagttagagaagtttgactt 170
|||||||||||||||||||||||
Sbjct: 153 tcaaagttagagaagtttgactt 175
>41838_bdi-MIR5169:mirbase
Length = 210
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 130 atttttctataaacttggtcaaa 152
|||||||||||||||||||||||
Sbjct: 155 atttttctataaacttggtcaaa 177
>42631_sbi-MIR1435a:mirbase
Length = 287
Score = 44.1 bits (22), Expect = 3e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 108 ttgatgtagcagatgtttgtgcatttttctataaacttggtcaaag 153
||||||| | ||||||| ||||| ||||| |||||||||||||||
Sbjct: 182 ttgatgttgtagatgttgatgcatctttctgtaaacttggtcaaag 227
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 aaaatatattaacatctacaa 51
|||||||||||||||||||||
Sbjct: 100 aaaatatattaacatctacaa 120
