miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42620_sbi-MIR437u:mirbase
Length = 164
Score = 283 bits (143), Expect = 2e-77
Identities = 157/164 (95%)
Strand = Plus / Plus
Query: 1 ttaaacctctaactgtgactgannnnnnnggaaaaatatattaacatctgcaagctgaaa 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 ttaaacctctaactgtgactgatttttttggaaaaatatattaacatctgcaagctgaaa 60
Query: 61 taagtgcactatcaagacatggagaatttaatgaaactaatttgatgtcatagatattgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taagtgcactatcaagacatggagaatttaatgaaactaatttgatgtcatagatattgg 120
Query: 121 cgtatttttctataaacttggtgaaagttagagaagtttgactt 164
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtatttttctataaacttggtgaaagttagagaagtttgactt 164
>42475_ssp-MIR437a:mirbase
Length = 175
Score = 85.7 bits (43), Expect = 1e-17
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 78 catggagaatttaatgaaactaatttgatgtcatagatattggcgtatttttctataaac 137
|||||||||||||||| ||||| |||||| | ||||| |||| | ||||||||||||||
Sbjct: 87 catggagaatttaatggaactagtttgatattctagattttggtgcatttttctataaac 28
Query: 138 ttggtgaaagttagagaagtttgactt 164
||| | ||||||||||| |||||||||
Sbjct: 27 ttgatcaaagttagagaggtttgactt 1
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 125 tttttctataaacttggtgaaagttagagaagtttgactt 164
|||||||| ||||||| | |||||||||||||||||||||
Sbjct: 136 tttttctaaaaacttgatcaaagttagagaagtttgactt 175
>42602_sbi-MIR437b:mirbase
Length = 171
Score = 79.8 bits (40), Expect = 6e-16
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 89 taatgaaactaatttgatgtcatagatattggcgtatttttctataaacttggtgaaagt 148
|||||||| ||||||||||| |||| |||| | ||||||||||||||||||| |||||
Sbjct: 97 taatgaaa-taatttgatgtttcagatgttggtgcatttttctataaacttggtcaaagt 155
Query: 149 tagagaagtttgactt 164
||||||||||||||||
Sbjct: 156 tagagaagtttgactt 171
>42607_sbi-MIR437g:mirbase
Length = 176
Score = 77.8 bits (39), Expect = 2e-15
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 82 gagaatttaatgaaactaatttgatgtcatagatattggcgtatttttctataaacttgg 141
|||||||| |||||||| |||||||| ||||| ||| | | ||||||||||||||||
Sbjct: 92 gagaatttggtgaaactagtttgatgttgtagatgttgatgcaattttctataaacttgg 151
Query: 142 tgaaagttagagaagtttgactt 164
| |||||||||||||||||||||
Sbjct: 152 tcaaagttagagaagtttgactt 174
>42604_sbi-MIR437d:mirbase
Length = 136
Score = 77.8 bits (39), Expect = 2e-15
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 90 aatgaaactaatttgatgtcatagatattggcgtatttttctataaacttggtgaaagtt 149
|||||| ||||| |||||| || ||||||| | ||||| ||||||||||||| ||||||
Sbjct: 60 aatgaacctaatgtgatgttgtaaatattggtgcattttcctataaacttggttaaagtt 119
Query: 150 agagaagtttgactt 164
|||||||||||||||
Sbjct: 120 agagaagtttgactt 134
>42619_sbi-MIR437t:mirbase
Length = 170
Score = 73.8 bits (37), Expect = 4e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 124 atttttctataaacttggtgaaagttagagaagtttgactt 164
||||||||||||||||||| |||||||||||||||||||||
Sbjct: 130 atttttctataaacttggtcaaagttagagaagtttgactt 170
>42606_sbi-MIR437f:mirbase
Length = 174
Score = 73.8 bits (37), Expect = 4e-14
Identities = 69/79 (87%), Gaps = 3/79 (3%)
Strand = Plus / Plus
Query: 86 atttaatgaaactaatttgatgtcatagatattggcgtatttttctataaacttggtgaa 145
||||||||||||||||||| ||| ||| |||| | | ||||||||||||||||| ||
Sbjct: 97 atttaatgaaactaatttgttgtt---gatcttggtgcacttttctataaacttggtcaa 153
Query: 146 agttagagaagtttgactt 164
|||||||||||||||||||
Sbjct: 154 agttagagaagtttgactt 172
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 144 aaagttagagaagtttgact 163
||||||||||||||||||||
Sbjct: 20 aaagttagagaagtttgact 1
>42063_osa-MIR437:mirbase
Length = 213
Score = 73.8 bits (37), Expect = 4e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 124 atttttctataaacttggtgaaagttagagaagtttgactt 164
||||||||||||||||||| |||||||||||||||||||||
Sbjct: 135 atttttctataaacttggtcaaagttagagaagtttgactt 175
>42622_sbi-MIR437w:mirbase
Length = 173
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 125 tttttctataaacttggtgaaagttagagaagtttgactt 164
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 134 tttttctaaaaacttggtgaaagttagagaagtttgactt 173
Score = 52.0 bits (26), Expect = 1e-07
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 81 ggagaatttaatgaaactaatttgatgtcatagatattggcgtatttttctataaacttg 140
|||||||||||||| ||||||||||||| | || ||| | |||||||||||||||||
Sbjct: 80 ggagaatttaatgatactaatttgatgttggaaatgttgatgcatttttctataaacttg 21
Query: 141 gt 142
||
Sbjct: 20 gt 19
>42621_sbi-MIR437v:mirbase
Length = 114
Score = 69.9 bits (35), Expect = 6e-13
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 78 catggagaatttaatgaaactaatttgatgtcatagatattggcgtatttttctataaac 137
||||||| |||| |||||||| |||||| | ||||| ||| | ||||||||||||||
Sbjct: 28 catggagcatttgatgaaactgctttgatattgtagatgttgatgcatttttctataaac 87
Query: 138 ttggtgaaagttagagaagtttgactt 164
|||| |||||||||||||||||||||
Sbjct: 88 ttggacaaagttagagaagtttgactt 114
>42613_sbi-MIR437n:mirbase
Length = 182
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 123 tatttttctataaacttggtgaaagttagagaagtttgactt 164
|||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 139 tatttttctacaaacttggttaaagttagagaagtttgactt 180
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 126 ttttctataaacttggtgaaagttagaga 154
||||||||||||||||| |||||| ||||
Sbjct: 39 ttttctataaacttggtcaaagttggaga 11
>42610_sbi-MIR437k:mirbase
Length = 172
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 123 tatttttctataaacttggtgaaagttagagaagtttgactt 164
|||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 129 tatttttctaaaaacttggtcaaagttagagaagtttgactt 170
Score = 60.0 bits (30), Expect = 5e-10
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 117 ttggcgtatttttctataaacttggtgaaagttagagaagtttgac 162
|||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 48 ttggtgtatttttctataagtttggtcaaagttagagaagtttgac 3
>42608_sbi-MIR437i:mirbase
Length = 170
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 111 tagatattggcgtatttttctataaacttggtgaaagttagagaagtttgactt 164
|||||| ||| | |||||||||||||||| || |||||||||||||||||||||
Sbjct: 117 tagataatggtgcatttttctataaactttgtcaaagttagagaagtttgactt 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 127 tttctataaacttggtgaaagttagagaagtttgac 162
|||||| ||||||||| ||||||| |||||||||||
Sbjct: 36 tttctagaaacttggtcaaagttaaagaagtttgac 1
>42609_sbi-MIR437j:mirbase
Length = 172
Score = 65.9 bits (33), Expect = 9e-12
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 126 ttttctataaacttggtgaaagttagagaagtttgac 162
||||||||||||||||| |||||||||||||||||||
Sbjct: 37 ttttctataaacttggtcaaagttagagaagtttgac 1
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 134 aaacttggtgaaagttagagaagtttgactt 164
|||| |||| |||||||||||||||||||||
Sbjct: 142 aaacatggtcaaagttagagaagtttgactt 172
>42615_sbi-MIR437p:mirbase
Length = 188
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 125 tttttctataaacttggtgaaagttagagaagtttgactt 164
|||||| ||||||||||| |||||||||||||||||||||
Sbjct: 147 tttttcaataaacttggtcaaagttagagaagtttgactt 186
>42617_sbi-MIR437r:mirbase
Length = 180
Score = 61.9 bits (31), Expect = 1e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 122 gtatttttctataaacttggtgaaagttagagaagtttgactt 164
|||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 136 gtatatttctataaacttggccaaagttagagaagtttgactt 178
Score = 52.0 bits (26), Expect = 1e-07
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 78 catggagaatttaatgaaactaatttgatgtcatagatattggcgtatttttctataaac 137
||||| ||||| ||| ||||||||||||||| || ||||| | ||||||||||| ||
Sbjct: 86 catggtgaattgaataaaactaatttgatgttgtaaatattagtacatttttctatagac 27
Query: 138 ttggtgaaagttagagaagttt 159
||||| ||| | ||||||||||
Sbjct: 26 ttggtcaaaataagagaagttt 5
>42611_sbi-MIR437l:mirbase
Length = 170
Score = 60.0 bits (30), Expect = 5e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 123 tatttttctataaacttggtgaaagttagagaagtttgactt 164
|||||||||| |||||||| |||||||||||||||||||||
Sbjct: 129 tatttttctaaaaacttggccaaagttagagaagtttgactt 170
>42605_sbi-MIR437e:mirbase
Length = 101
Score = 60.0 bits (30), Expect = 5e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 123 tatttttctataaacttggtgaaagttagagaagtttgactt 164
||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 60 tatttttctgaaaacttggtcaaagttagagaagtttgactt 101
>42476_ssp-MIR437b:mirbase
Length = 172
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 123 tatttttctataaacttggtgaaagttagagaagtttgac 162
||||||| |||||||||||| ||||||||| |||||||||
Sbjct: 131 tatttttgtataaacttggtcaaagttagacaagtttgac 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 32 aaaaatatattaacatctgcaagctgaaataagtgcactatcaa 75
||||||||||||| |||||||| | |||||| |||||||||||
Sbjct: 137 aaaaatatattaatatctgcaatatcaaataaatgcactatcaa 94
>42614_sbi-MIR437o:mirbase
Length = 175
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 82 gagaatttaatgaaactaatttgatgt 108
|||||||||||||||||||||||||||
Sbjct: 80 gagaatttaatgaaactaatttgatgt 54
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 125 tttttctataaacttggtgaaagttagagaagtttgactt 164
||||| || |||||| || |||||||||||||||||||||
Sbjct: 134 tttttataaaaacttagtcaaagttagagaagtttgactt 173
>42612_sbi-MIR437m:mirbase
Length = 174
Score = 54.0 bits (27), Expect = 3e-08
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 80 tggagaatttaatgaaactaatttgatgtcatagatattggcgtatttttctataaactt 139
|||| ||||||||||| |||||||||| | ||||| |||| | ||||||||| |||||
Sbjct: 83 tggaaaatttaatgaagctaatttgatattctagatgttggtgcatttttctagtaactt 24
Query: 140 ggtgaaagttagagaagtttgac 162
| | ||||||||| ||||||||
Sbjct: 23 gtttaaagttagatgagtttgac 1
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/41 (90%), Gaps = 2/41 (4%)
Strand = Plus / Plus
Query: 126 ttttctataaacttggtgaaa--gttagagaagtttgactt 164
||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 132 ttttctaaaaacttggtcaaaaagttagagaagtttgactt 172
>42618_sbi-MIR437s:mirbase
Length = 176
Score = 52.0 bits (26), Expect = 1e-07
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 83 agaatttaatgaaactaatttgatgtcatagatattggcgtatttttctataaacttggt 142
||||| |||||||||| || |||| | ||||| || | || ||||||||||||| |||
Sbjct: 82 agaatctaatgaaactcatctgatattctagatgtttgagtgtttttctataaacctgga 23
Query: 143 gaaagttagagaagtttgactt 164
||||||| |||||||||||||
Sbjct: 22 caaagttaaagaagtttgactt 1
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 aaagttagagaagtttgactt 164
|||||||||||||||||||||
Sbjct: 154 aaagttagagaagtttgactt 174
>42616_sbi-MIR437q:mirbase
Length = 160
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 127 tttctataaacttggtgaaagttagagaagtttgactt 164
|||||||| | ||||| |||||||||||||||||||||
Sbjct: 121 tttctatagagttggtaaaagttagagaagtttgactt 158
>42477_ssp-MIR437c:mirbase
Length = 177
Score = 46.1 bits (23), Expect = 8e-06
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 31 gaaaaatatattaacatctgcaagctgaaataagtgcactatcaaga 77
||||||||||||||||||| |||| | ||||| |||||||| ||||
Sbjct: 143 gaaaaatatattaacatctacaagttcgaataaatgcactattaaga 97
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 123 tatttttctataaacttggtgaaagttagagaagtttgactt 164
|||||||||| || ||||| |||||||||||||| ||||||
Sbjct: 136 tatttttctaaaactttggtcaaagttagagaagtctgactt 177
>41804_bdi-MIR437:mirbase
Length = 141
Score = 46.1 bits (23), Expect = 8e-06
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 90 aatgaaactaatttgatgtcatagatattggcgtatttttctataaacttggtgaaagtt 149
||||||||||||||| ||||||| | |||| ||||| |||| || ||||| || ||
Sbjct: 39 aatgaaactaatttggtgtcataagtcttggtatatttgtctaaaagattggtcgaactt 98
Query: 150 agagaagtttgactt 164
|||||||||||||||
Sbjct: 99 agagaagtttgactt 113
>42631_sbi-MIR1435a:mirbase
Length = 287
Score = 44.1 bits (22), Expect = 3e-05
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 78 catggagaatttaatgaaactaatttgatgtcatagatattggcgtatttttctataaac 137
||||||| |||||||||||| || ||||||| ||||| ||| | || ||||| |||||
Sbjct: 158 catggaggatttaatgaaacaaacttgatgttgtagatgttgatgcatctttctgtaaac 217
Query: 138 ttggtgaaag 147
||||| ||||
Sbjct: 218 ttggtcaaag 227
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 33 aaaatatattaacatctgcaagctgaaataagtgca 68
||||||||||||||||| |||| | |||||| ||||
Sbjct: 100 aaaatatattaacatctacaagttcaaataaatgca 135
>42603_sbi-MIR437c:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 aaagttagagaagtttgactt 164
|||||||||||||||||||||
Sbjct: 155 aaagttagagaagtttgactt 175
>42601_sbi-MIR437a:mirbase
Length = 190
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 aaagttagagaagtttgactt 164
|||||||||||||||||||||
Sbjct: 168 aaagttagagaagtttgactt 188
>41838_bdi-MIR5169:mirbase
Length = 210
Score = 42.1 bits (21), Expect = 1e-04
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 86 atttaatgaaactaatttgatgtcatagatattggcgtatttttctataaacttggt 142
||||||| |||||||||| || ||||| |||| ||||||||||||||||||||
Sbjct: 117 atttaataaaactaatttagagttgtagatgttggtatatttttctataaacttggt 173
