miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42621_sbi-MIR437v:mirbase
Length = 114
Score = 226 bits (114), Expect = 3e-60
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 1 gtcaaacttactttcactgacttatatcatggagcatttgatgaaactgctttgatattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcaaacttactttcactgacttatatcatggagcatttgatgaaactgctttgatattg 60
Query: 61 tagatgttgatgcatttttctataaacttggacaaagttagagaagtttgactt 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagatgttgatgcatttttctataaacttggacaaagttagagaagtttgactt 114
>42607_sbi-MIR437g:mirbase
Length = 176
Score = 111 bits (56), Expect = 1e-25
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 27 tcatggagcatttgatgaaactgctttgatattgtagatgttgatgcatttttctataaa 86
|||| ||| ||||| ||||||| |||||| ||||||||||||||||| |||||||||||
Sbjct: 87 tcatagagaatttggtgaaactagtttgatgttgtagatgttgatgcaattttctataaa 146
Query: 87 cttggacaaagttagagaagtttgactt 114
||||| ||||||||||||||||||||||
Sbjct: 147 cttggtcaaagttagagaagtttgactt 174
>42602_sbi-MIR437b:mirbase
Length = 171
Score = 89.7 bits (45), Expect = 4e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 62 agatgttgatgcatttttctataaacttggacaaagttagagaagtttgactt 114
|||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 119 agatgttggtgcatttttctataaacttggtcaaagttagagaagtttgactt 171
>42475_ssp-MIR437a:mirbase
Length = 175
Score = 87.7 bits (44), Expect = 2e-18
Identities = 77/88 (87%)
Strand = Plus / Minus
Query: 27 tcatggagcatttgatgaaactgctttgatattgtagatgttgatgcatttttctataaa 86
|||||||| |||| ||| |||| ||||||||| ||||| ||| ||||||||||||||||
Sbjct: 88 tcatggagaatttaatggaactagtttgatattctagattttggtgcatttttctataaa 29
Query: 87 cttggacaaagttagagaagtttgactt 114
|||| |||||||||||| |||||||||
Sbjct: 28 cttgatcaaagttagagaggtttgactt 1
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 75 tttttctataaacttggacaaagttagagaagtttgactt 114
|||||||| ||||||| ||||||||||||||||||||||
Sbjct: 136 tttttctaaaaacttgatcaaagttagagaagtttgactt 175
>42619_sbi-MIR437t:mirbase
Length = 170
Score = 81.8 bits (41), Expect = 1e-16
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 62 agatgttgatgcatttttctataaacttggacaaagttagagaagtttgactt 114
||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 118 agatgtttgtgcatttttctataaacttggtcaaagttagagaagtttgactt 170
Score = 42.1 bits (21), Expect = 9e-05
Identities = 52/62 (83%), Gaps = 4/62 (6%)
Strand = Plus / Minus
Query: 51 tttgatattgtagatgttgatgcatttttctataaacttggacaaagttagagaagtttg 110
|||||||||||||||||| || ||||||| ||||||| ||||| |||| |||||||
Sbjct: 58 tttgatattgtagatgttaatatatttttc----aacttggtcaaagatagacaagtttg 3
Query: 111 ac 112
||
Sbjct: 2 ac 1
>42615_sbi-MIR437p:mirbase
Length = 188
Score = 73.8 bits (37), Expect = 2e-14
Identities = 77/89 (86%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 27 tcatggagcatttgatgaaactgctttgatattgtagatgttgatgcattttt-ctataa 85
|||||| | ||||||||||||| |||||| ||||| ||||| | ||||||| | ||||
Sbjct: 98 tcatggtggatttgatgaaactaatttgattttgtatgtgttggtccattttttcaataa 157
Query: 86 acttggacaaagttagagaagtttgactt 114
|||||| ||||||||||||||||||||||
Sbjct: 158 acttggtcaaagttagagaagtttgactt 186
>42606_sbi-MIR437f:mirbase
Length = 174
Score = 73.8 bits (37), Expect = 2e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 58 ttgtagatgttgatgcatttttctataaacttggacaaagttagagaagtttgactt 114
|||| ||| ||| |||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 116 ttgttgatcttggtgcacttttctataaacttggtcaaagttagagaagtttgactt 172
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 93 caaagttagagaagtttgact 113
|||||||||||||||||||||
Sbjct: 21 caaagttagagaagtttgact 1
>42063_osa-MIR437:mirbase
Length = 213
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 74 atttttctataaacttggacaaagttagagaagtttgactt 114
|||||||||||||||||| ||||||||||||||||||||||
Sbjct: 135 atttttctataaacttggtcaaagttagagaagtttgactt 175
>42608_sbi-MIR437i:mirbase
Length = 170
Score = 71.9 bits (36), Expect = 1e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 71 tgcatttttctataaacttggacaaagttagagaagtttgactt 114
||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 127 tgcatttttctataaactttgtcaaagttagagaagtttgactt 170
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 77 tttctataaacttggacaaagttagagaagtttgac 112
|||||| |||||||| |||||||| |||||||||||
Sbjct: 36 tttctagaaacttggtcaaagttaaagaagtttgac 1
>42620_sbi-MIR437u:mirbase
Length = 164
Score = 69.9 bits (35), Expect = 4e-13
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 28 catggagcatttgatgaaactgctttgatattgtagatgttgatgcatttttctataaac 87
||||||| |||| |||||||| |||||| | ||||| ||| | ||||||||||||||
Sbjct: 78 catggagaatttaatgaaactaatttgatgtcatagatattggcgtatttttctataaac 137
Query: 88 ttggacaaagttagagaagtttgactt 114
|||| |||||||||||||||||||||
Sbjct: 138 ttggtgaaagttagagaagtttgactt 164
>42611_sbi-MIR437l:mirbase
Length = 170
Score = 69.9 bits (35), Expect = 4e-13
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 60 gtagatgttgatgcatttttctataaacttggacaaagttagagaagtttgactt 114
||||||||| || ||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 116 gtagatgttaatatatttttctaaaaacttggccaaagttagagaagtttgactt 170
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 65 tgttgatgcatttttctataaacttggacaaagtta 100
||||| |||||||||||||||| |||| ||| ||||
Sbjct: 48 tgttggtgcatttttctataaatttggtcaatgtta 13
>42617_sbi-MIR437r:mirbase
Length = 180
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 77 tttctataaacttggacaaagttagagaagtttgactt 114
||||||||||||||| ||||||||||||||||||||||
Sbjct: 141 tttctataaacttggccaaagttagagaagtttgactt 178
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 73 catttttctataaacttggacaaagttagagaagttt 109
|||||||||||| |||||| |||| | ||||||||||
Sbjct: 41 catttttctatagacttggtcaaaataagagaagttt 5
>42604_sbi-MIR437d:mirbase
Length = 136
Score = 67.9 bits (34), Expect = 2e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 53 tgatattgtagatgttgatgcatttttctataaacttggacaaagttagagaagtttgac 112
|||| ||||| || ||| |||||||| |||||||||||| |||||||||||||||||||
Sbjct: 73 tgatgttgtaaatattggtgcattttcctataaacttggttaaagttagagaagtttgac 132
Query: 113 tt 114
||
Sbjct: 133 tt 134
>42610_sbi-MIR437k:mirbase
Length = 172
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 74 atttttctataaacttggacaaagttagagaagtttgactt 114
||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 130 atttttctaaaaacttggtcaaagttagagaagtttgactt 170
Score = 56.0 bits (28), Expect = 6e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 65 tgttgatgcatttttctataaacttggacaaagttagagaagtttgac 112
||||| || |||||||||||| |||| ||||||||||||||||||||
Sbjct: 50 tgttggtgtatttttctataagtttggtcaaagttagagaagtttgac 3
>42609_sbi-MIR437j:mirbase
Length = 172
Score = 65.9 bits (33), Expect = 6e-12
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 76 ttttctataaacttggacaaagttagagaagtttgac 112
|||||||||||||||| ||||||||||||||||||||
Sbjct: 37 ttttctataaacttggtcaaagttagagaagtttgac 1
Score = 58.0 bits (29), Expect = 1e-09
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 58 ttgtagatgttgatgcatttttctataaacttggacaaagttagagaagtttgactt 114
||||||||||| ||| |||||| | |||| ||| ||||||||||||||||||||||
Sbjct: 116 ttgtagatgttaatgtattttttgaaaaacatggtcaaagttagagaagtttgactt 172
>42618_sbi-MIR437s:mirbase
Length = 176
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 75 tttttctataaacttggacaaagttagagaagtttgactt 114
||||||||||||| |||||||||||| |||||||||||||
Sbjct: 40 tttttctataaacctggacaaagttaaagaagtttgactt 1
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 caaagttagagaagtttgactt 114
||||||||||||||||||||||
Sbjct: 153 caaagttagagaagtttgactt 174
>42631_sbi-MIR1435a:mirbase
Length = 287
Score = 61.9 bits (31), Expect = 9e-11
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 27 tcatggagcatttgatgaaactgctttgatattgtagatgttgatgcatttttctataaa 86
|||||||| |||| ||||||| ||||| |||||||||||||||||| ||||| ||||
Sbjct: 157 tcatggaggatttaatgaaacaaacttgatgttgtagatgttgatgcatctttctgtaaa 216
Query: 87 cttggacaaag 97
||||| |||||
Sbjct: 217 cttggtcaaag 227
>42476_ssp-MIR437b:mirbase
Length = 172
Score = 60.0 bits (30), Expect = 4e-10
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 51 tttgatattgtagatgttgatgcatttttctataaacttggacaaagttagagaagtttg 110
|||||||||| |||| || || |||||| ||||||||||| |||||||||| |||||||
Sbjct: 109 tttgatattgcagatattaatatatttttgtataaacttggtcaaagttagacaagtttg 168
Query: 111 ac 112
||
Sbjct: 169 ac 170
>42622_sbi-MIR437w:mirbase
Length = 173
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 51 tttgatattgtagatgttgatgcatttttctataaacttgg 91
|||||| ||| | ||||||||||||||||||||||||||||
Sbjct: 60 tttgatgttggaaatgttgatgcatttttctataaacttgg 20
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 75 tttttctataaacttggacaaagttagagaagtttgactt 114
|||||||| |||||||| |||||||||||||||||||||
Sbjct: 134 tttttctaaaaacttggtgaaagttagagaagtttgactt 173
>42613_sbi-MIR437n:mirbase
Length = 182
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 74 atttttctataaacttggacaaagttagagaagtttgactt 114
||||||||| |||||||| |||||||||||||||||||||
Sbjct: 140 atttttctacaaacttggttaaagttagagaagtttgactt 180
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 76 ttttctataaacttggacaaagttagaga 104
|||||||||||||||| ||||||| ||||
Sbjct: 39 ttttctataaacttggtcaaagttggaga 11
>42605_sbi-MIR437e:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 74 atttttctataaacttggacaaagttagagaagtttgactt 114
|||||||| |||||||| ||||||||||||||||||||||
Sbjct: 61 atttttctgaaaacttggtcaaagttagagaagtttgactt 101
>42477_ssp-MIR437c:mirbase
Length = 177
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 52 ttgatattgtagatgttgatgcatttttctataaa 86
|||||||||||||||||||| |||||||| |||||
Sbjct: 64 ttgatattgtagatgttgatacatttttccataaa 30
Score = 50.1 bits (25), Expect = 4e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 58 ttgtagatgttgatgcatttttctataaacttggacaaagttagagaagtttgactt 114
||||||||||| || ||||||||| || |||| ||||||||||||||| ||||||
Sbjct: 121 ttgtagatgttaatatatttttctaaaactttggtcaaagttagagaagtctgactt 177
>42612_sbi-MIR437m:mirbase
Length = 174
Score = 52.0 bits (26), Expect = 9e-08
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 51 tttgatattgtagatgttgatgcatttttctataaacttggacaaagttagagaagtttg 110
||||||||| ||||||||| |||||||||||| |||||| ||||||||| ||||||
Sbjct: 62 tttgatattctagatgttggtgcatttttctagtaacttgtttaaagttagatgagtttg 3
Query: 111 ac 112
||
Sbjct: 2 ac 1
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/41 (90%), Gaps = 2/41 (4%)
Strand = Plus / Plus
Query: 76 ttttctataaacttggacaaa--gttagagaagtttgactt 114
||||||| |||||||| |||| ||||||||||||||||||
Sbjct: 132 ttttctaaaaacttggtcaaaaagttagagaagtttgactt 172
>42614_sbi-MIR437o:mirbase
Length = 175
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 75 tttttctataaacttggacaaagttagagaagtttgactt 114
||||| || |||||| | ||||||||||||||||||||||
Sbjct: 134 tttttataaaaacttagtcaaagttagagaagtttgactt 173
Score = 42.1 bits (21), Expect = 9e-05
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 27 tcatggagcatttgatgaaactgctttgatattgtagatgttgatgcatttttctataaa 86
|||| ||| |||| |||||||| |||||| ||||||| | || |||||||||||| |||
Sbjct: 85 tcatagagaatttaatgaaactaatttgatgttgtagaggatggtgcatttttctaaaaa 26
Query: 87 c 87
|
Sbjct: 25 c 25
>41838_bdi-MIR5169:mirbase
Length = 210
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 58 ttgtagatgttgatgcatttttctataaacttggacaaa 96
|||||||||||| | |||||||||||||||||| ||||
Sbjct: 139 ttgtagatgttggtatatttttctataaacttggtcaaa 177
>42616_sbi-MIR437q:mirbase
Length = 160
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 77 tttctataaacttggacaaagttagagaagtttgactt 114
|||||||| | |||| |||||||||||||||||||||
Sbjct: 121 tttctatagagttggtaaaagttagagaagtttgactt 158
>42603_sbi-MIR437c:mirbase
Length = 175
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 caaagttagagaagtttgactt 114
||||||||||||||||||||||
Sbjct: 154 caaagttagagaagtttgactt 175
>42601_sbi-MIR437a:mirbase
Length = 190
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 caaagttagagaagtttgactt 114
||||||||||||||||||||||
Sbjct: 167 caaagttagagaagtttgactt 188
