miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41527_sly-MIR156c:mirbase
Length = 83
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacgaataacgaggtgctaattggaacatgcaccttaattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcacgaataacgaggtgctaattggaacatgcaccttaattct 60
Query: 61 ttgtgctctcattcttttgtcat 83
|||||||||||||||||||||||
Sbjct: 61 ttgtgctctcattcttttgtcat 83
>41526_sly-MIR156b:mirbase
Length = 84
Score = 99.6 bits (50), Expect = 3e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacgaataacgaggtgctaattggaacatgcaccttaattct 60
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 1 ttgacagaagatagagagcacgaataatgaggtgctaattggaagctgcaccttaattcc 60
Query: 61 ttgtgctctc 70
||||| ||||
Sbjct: 61 ttgtgatctc 70
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
>41525_sly-MIR156a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcac 41
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcac 41
>41077_gra-MIR157b:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 5 ttgacagaagatagagagcac 25
>41076_gra-MIR157a:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 5 ttgacagaagatagagagcac 25
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
>40431_gma-MIR156g:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 24 ttgacagaagatagagagcac 44
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 107 ttgacagaagatagagagcac 87
>40429_gma-MIR156e:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcac 41
>40428_gma-MIR156d:mirbase
Length = 151
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcac 41
>40427_gma-MIR156c:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 146 ttgacagaagatagagagcac 166
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 23 ttgacagaagatagagagcac 43
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 23 ttgacagaagatagagagcac 43
>40337_rco-MIR156h:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
>40336_rco-MIR156g:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
>40335_rco-MIR156f:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
>40310_bra-MIR157a:mirbase
Length = 149
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 14 ttgacagaagatagagagcac 34
>40304_bol-MIR157a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
>40260_bna-MIR156c:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 18 ttgacagaagatagagagcac 38
>40259_bna-MIR156b:mirbase
Length = 208
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 25 ttgacagaagatagagagcac 45
>40012_ath-MIR157c:mirbase
Length = 217
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 24 ttgacagaagatagagagcac 44
>40011_ath-MIR157b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 19 ttgacagaagatagagagcac 39
>40010_ath-MIR157a:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 4 ttgacagaagatagagagcac 24
>39800_aly-MIR157c:mirbase
Length = 293
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 55 ttgacagaagatagagagcac 75
>39799_aly-MIR157b:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 4 ttgacagaagatagagagcac 24
>39798_aly-MIR157a:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 16 ttgacagaagatagagagcac 36
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>40013_ath-MIR157d:mirbase
Length = 221
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcac 43
>39801_aly-MIR157d:mirbase
Length = 256
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 38 tgacagaagatagagagcac 57
>39727_smo-MIR156b:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>39416_pta-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>39415_pta-MIR156a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
