miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41548_sly-MIR399:mirbase
Length = 71
Score = 141 bits (71), Expect = 7e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 tagggctacactctattggcatgcaacttgatcaaatatttgagctgaaatgccaaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagggctacactctattggcatgcaacttgatcaaatatttgagctgaaatgccaaagga 60
Query: 61 gagttgcccta 71
|||||||||||
Sbjct: 61 gagttgcccta 71
>42827_zma-MIR399i:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 49 aatgccaaaggagagttgccct 70
||||||||||||||||||||||
Sbjct: 68 aatgccaaaggagagttgccct 89
>41249_csi-MIR399d:mirbase
Length = 130
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 ctgaaatgccaaaggagagttgccct 70
|||| |||||||||||||||||||||
Sbjct: 94 ctgatatgccaaaggagagttgccct 119
>42050_osa-MIR399j:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgcccta 71
|||||||||||||||||||||
Sbjct: 76 tgccaaaggagagttgcccta 96
>41456_ptc-MIR399i:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgcccta 71
|||||||||||||||||||||
Sbjct: 79 tgccaaaggagagttgcccta 99
>41247_csi-MIR399b:mirbase
Length = 168
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgcccta 71
|||||||||||||||||||||
Sbjct: 125 tgccaaaggagagttgcccta 145
>41192_aqc-MIR399:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgcccta 71
|||||||||||||||||||||
Sbjct: 72 tgccaaaggagagttgcccta 92
>42828_zma-MIR399j:mirbase
Length = 175
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 154 tgccaaaggagagttgccct 173
>42823_zma-MIR399e:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 85 tgccaaaggagagttgccct 104
>42597_sbi-MIR399i:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 82 tgccaaaggagagttgccct 101
>42592_sbi-MIR399d:mirbase
Length = 205
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 166 tgccaaaggagagttgccct 185
>42044_osa-MIR399d:mirbase
Length = 286
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 256 tgccaaaggagagttgccct 275
>41670_vvi-MIR399c:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 52 tgccaaaggagagttgccct 71
>41669_vvi-MIR399b:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 87 tgccaaaggagagttgccct 106
>41154_tcc-MIR399i:mirbase
Length = 157
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 117 tgccaaaggagagttgccct 136
>41027_pvu-MIR399a:mirbase
Length = 223
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 89 tgccaaaggagagttgccct 108
>40746_mtr-MIR399p:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 54 tgccaaaggagagttgccct 73
>40742_mtr-MIR399l:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 54 tgccaaaggagagttgccct 73
>40383_rco-MIR399a:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 68 tgccaaaggagagttgccct 87
>40094_ath-MIR399c:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 84 tgccaaaggagagttgccct 103
>40093_ath-MIR399b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 105 tgccaaaggagagttgccct 124
>39886_aly-MIR399c:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 89 tgccaaaggagagttgccct 108
>39885_aly-MIR399b:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 106 tgccaaaggagagttgccct 125
>41676_vvi-MIR399i:mirbase
Length = 122
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 52 gccaaaggagagttgccct 70
|||||||||||||||||||
Sbjct: 93 gccaaaggagagttgccct 111
>41459_ptc-MIR399l:mirbase
Length = 109
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 52 gccaaaggagagttgccct 70
|||||||||||||||||||
Sbjct: 82 gccaaaggagagttgccct 100
>41146_tcc-MIR399a:mirbase
Length = 136
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 52 gccaaaggagagttgccct 70
|||||||||||||||||||
Sbjct: 97 gccaaaggagagttgccct 115
