miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41460_ptc-MIR403a:mirbase
          Length = 132

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 22 aggcatatttcacgtttgtgcgtgaatctaa 52
          |||||||||||| |||||||| |||||||||
Sbjct: 1  aggcatatttcaggtttgtgcatgaatctaa 31



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 88  tagattcacgcacaagctcgtaat 111
           ||||||||||||||| ||||||||
Sbjct: 104 tagattcacgcacaaactcgtaat 127




>41155_tcc-MIR403a:mirbase
          Length = 126

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 88  tagattcacgcacaagctcgtaatatggcttttc 121
           ||||||||||||||| |||||||| || ||||||
Sbjct: 87  tagattcacgcacaaactcgtaatctgtcttttc 120



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                           
Query: 16 aggaagaggcatatttcacgtttgtgcgtgaat 48
          |||| |||||| |||||| ||||||||||||||
Sbjct: 3  aggaggaggcagatttcaggtttgtgcgtgaat 35



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 35  gtttgtgcgtgaatctaaca 54
           ||||||||||||||||||||
Sbjct: 103 gtttgtgcgtgaatctaaca 84




>39896_aly-MIR403:mirbase
          Length = 125

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 88  tagattcacgcacaagctcgtaatatggcttttc 121
           ||||||||||||||| |||||||| || ||||||
Sbjct: 92  tagattcacgcacaaactcgtaatctgtcttttc 125




>41682_vvi-MIR403f:mirbase
          Length = 108

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 88  tagattcacgcacaagctcgtaat 111
           ||||||||||||||| ||||||||
Sbjct: 79  tagattcacgcacaaactcgtaat 102




>41680_vvi-MIR403d:mirbase
          Length = 86

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 35 gtttgtgcgtgaatctaaca 54
          ||||||||||||||||||||
Sbjct: 73 gtttgtgcgtgaatctaaca 54




>41678_vvi-MIR403b:mirbase
          Length = 86

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 35 gtttgtgcgtgaatctaaca 54
          ||||||||||||||||||||
Sbjct: 73 gtttgtgcgtgaatctaaca 54




>41251_csi-MIR403:mirbase
          Length = 130

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 35  gtttgtgcgtgaatctaaca 54
           ||||||||||||||||||||
Sbjct: 117 gtttgtgcgtgaatctaaca 98




>41156_tcc-MIR403b:mirbase
          Length = 123

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 35  gtttgtgcgtgaatctaaca 54
           ||||||||||||||||||||
Sbjct: 100 gtttgtgcgtgaatctaaca 81




>40390_rco-MIR403b:mirbase
          Length = 98

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 35 gtttgtgcgtgaatctaaca 54
          ||||||||||||||||||||
Sbjct: 90 gtttgtgcgtgaatctaaca 71




>40389_rco-MIR403a:mirbase
          Length = 95

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 35 gtttgtgcgtgaatctaaca 54
          ||||||||||||||||||||
Sbjct: 87 gtttgtgcgtgaatctaaca 68




>40101_ath-MIR403:mirbase
          Length = 135

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 88  tagattcacgcacaagctcgtaat 111
           ||||||||||||||| ||||||||
Sbjct: 104 tagattcacgcacaaactcgtaat 127