miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41550_sly-MIR1916:mirbase
Length = 214
Score = 424 bits (214), Expect = e-119
Identities = 214/214 (100%)
Strand = Plus / Plus
Query: 1 gcctaacttattggtgacctcttaaatttggcacgaaatttcacttagacacctcaagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcctaacttattggtgacctcttaaatttggcacgaaatttcacttagacacctcaagta 60
Query: 61 aagtgatgttcattttagacagctcatgtaaggtcttgttgtgtcattttgatacaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtgatgttcattttagacagctcatgtaaggtcttgttgtgtcattttgatacaacaa 120
Query: 121 aaccctacatgaggtgtctaaaatgaacatcgcctacttgaagtgcctaagtgaaatttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaccctacatgaggtgtctaaaatgaacatcgcctacttgaagtgcctaagtgaaatttc 180
Query: 181 gtgtcaagtttaaaggatcaccaatgaattaggc 214
||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgtcaagtttaaaggatcaccaatgaattaggc 214
Score = 133 bits (67), Expect = 6e-32
Identities = 180/215 (83%), Gaps = 2/215 (0%)
Strand = Plus / Minus
Query: 1 gcctaacttattggtgacctcttaaatttggcacgaaatttcacttagacacctcaagta 60
|||||| | |||||||| | ||||| ||| ||||||||||||||||| ||| |||||||
Sbjct: 214 gcctaattcattggtgatcctttaaacttgacacgaaatttcacttaggcacttcaagta 155
Query: 61 aagtgatgttcattttagacagctcatgtaaggtcttgttgtgtcattttgatacaacaa 120
| ||||||||||||||||| |||||||| ||| ||||||| ||| ||| |||||||
Sbjct: 154 g-gcgatgttcattttagacacctcatgtagggttttgttgtatcaaaatgacacaacaa 96
Query: 121 aaccctacatgaggtgtctaaaatgaacatcgc-ctacttgaagtgcctaagtgaaattt 179
||| |||||||| ||||||||||||||||| | ||||||| ||| |||||||||||||
Sbjct: 95 gaccttacatgagctgtctaaaatgaacatcactttacttgaggtgtctaagtgaaattt 36
Query: 180 cgtgtcaagtttaaaggatcaccaatgaattaggc 214
|||| ||| ||||| | |||||||| | ||||||
Sbjct: 35 cgtgccaaatttaagaggtcaccaataagttaggc 1
