miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>41553_sly-MIR1919a:mirbase
          Length = 123

 Score =  244 bits (123), Expect = 1e-65
 Identities = 123/123 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atcttccggtagtcctgtcgcagatgactctcgatcttgtcattaagcccctttctctaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atcttccggtagtcctgtcgcagatgactctcgatcttgtcattaagcccctttctctaa 60

                                                                       
Query: 61  gtctaattaatttgaattcaatgtggtaggacgagagtcatctgtgacaggattatggaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtctaattaatttgaattcaatgtggtaggacgagagtcatctgtgacaggattatggaa 120

              
Query: 121 gat 123
           |||
Sbjct: 121 gat 123




>41555_sly-MIR1919c:mirbase
          Length = 144

 Score = 97.6 bits (49), Expect = 2e-21
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                    
Query: 67  ttaatttgaattcaatgtggtaggacgagagtcatctgtgacaggattatggaagat 123
           ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 73  ttaatttgaattctatgtggtaggacgagagtcatctgtgacaggataatggaagat 129




>41554_sly-MIR1919b:mirbase
          Length = 144

 Score = 97.6 bits (49), Expect = 2e-21
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                    
Query: 67  ttaatttgaattcaatgtggtaggacgagagtcatctgtgacaggattatggaagat 123
           ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 73  ttaatttgaattctatgtggtaggacgagagtcatctgtgacaggataatggaagat 129