miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41867_far-MIR156b:mirbase
Length = 180
Score = 61.9 bits (31), Expect = 3e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaactggagtcggtgg 35
||||||||||||||||||||| |||||||||||||
Sbjct: 54 tgacagaagagagagagcacagctggagtcggtgg 88
>41866_far-MIR156a:mirbase
Length = 180
Score = 61.9 bits (31), Expect = 3e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaactggagtcggtgg 35
||||||||||||||||||||| |||||||||||||
Sbjct: 54 tgacagaagagagagagcacagctggagtcggtgg 88
>41726_bdi-MIR156:mirbase
Length = 147
Score = 56.0 bits (28), Expect = 2e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaactggagtcgg 32
||||||||||||||||||||| ||||||||||
Sbjct: 101 tgacagaagagagagagcacagctggagtcgg 132
>41877_far-MIR529:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 4e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaactggagtcgg 32
||||||||||||||||||||| || |||||||
Sbjct: 48 tgacagaagagagagagcacagcttgagtcgg 79
>42687_zma-MIR156j:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaac 43
>42488_sbi-MIR156d:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaac 43
>41914_osa-MIR156k:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||||||||||||||||
Sbjct: 11 tgacagaagagagagagcacaac 33
>41204_aqc-MIR529:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||||||||||||||||
Sbjct: 18 tgacagaagagagagagcacaac 40
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaac 43
>40430_gma-MIR156f:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||||||||||||||||
Sbjct: 12 tgacagaagagagagagcacaac 34
>40426_gma-MIR156b:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaac 43
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||||||||||||||||
Sbjct: 22 tgacagaagagagagagcacaac 44
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||||||||||||||||
Sbjct: 18 tgacagaagagagagagcacaac 40
>40334_rco-MIR156e:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||||||||||||||||
Sbjct: 6 tgacagaagagagagagcacaac 28
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 3e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaactg 25
|||||||||| ||||||||||||||
Sbjct: 12 tgacagaagatagagagcacaactg 36
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 3e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaactg 25
|||||||||| ||||||||||||||
Sbjct: 22 tgacagaagatagagagcacaactg 46
>40648_mtr-MIR156:mirbase
Length = 460
Score = 42.1 bits (21), Expect = 3e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>40335_rco-MIR156f:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 1e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaact 24
|||||||||| |||||||||||||
Sbjct: 7 tgacagaagatagagagcacaact 30
>41568_vvi-MIR156h:mirbase
Length = 228
Score = 38.2 bits (19), Expect = 4e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagca 19
|||||||||||||||||||
Sbjct: 11 tgacagaagagagagagca 29
>41561_vvi-MIR156a:mirbase
Length = 104
Score = 38.2 bits (19), Expect = 4e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
||||||||||||| |||||||||
Sbjct: 11 tgacagaagagagggagcacaac 33
>41298_ptc-MIR156k:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 4e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
||||||||||||| |||||||||
Sbjct: 11 tgacagaagagagggagcacaac 33
>40427_gma-MIR156c:mirbase
Length = 185
Score = 38.2 bits (19), Expect = 4e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||| ||||||||||||
Sbjct: 147 tgacagaagatagagagcacaac 169
>40009_ath-MIR156h:mirbase
Length = 106
Score = 38.2 bits (19), Expect = 4e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||| ||||||||||||
Sbjct: 12 tgacagaagaaagagagcacaac 34
>39797_aly-MIR156h:mirbase
Length = 99
Score = 38.2 bits (19), Expect = 4e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||| ||||||||||||
Sbjct: 8 tgacagaagaaagagagcacaac 30
>39416_pta-MIR156b:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 4e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacaac 23
|||||||||| ||||||||||||
Sbjct: 3 tgacagaagatagagagcacaac 25
