miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41867_far-MIR156b:mirbase
Length = 180
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 46 gtatcccatggctgagttgacagaagagagagagcac 82
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 gtatcccatggctgagttgacagaagagagagagcac 73
>41866_far-MIR156a:mirbase
Length = 180
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 46 gtatcccatggctgagttgacagaagagagagagcac 82
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 gtatcccatggctgagttgacagaagagagagagcac 73
>41726_bdi-MIR156:mirbase
Length = 147
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 48 atcccatggctgagttgacagaagagagagagcac 82
|||||||||||||||||||||||||||||||||||
Sbjct: 86 atcccatggctgagttgacagaagagagagagcac 120
>41877_far-MIR529:mirbase
Length = 120
Score = 52.0 bits (26), Expect = 6e-08
Identities = 37/40 (92%), Gaps = 3/40 (7%)
Strand = Plus / Plus
Query: 46 gtatcccatggctgagt---tgacagaagagagagagcac 82
||||||||||||||||| ||||||||||||||||||||
Sbjct: 28 gtatcccatggctgagtacttgacagaagagagagagcac 67
>41204_aqc-MIR529:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 gttgacagaagagagagagcac 82
||||||||||||||||||||||
Sbjct: 16 gttgacagaagagagagagcac 37
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 gttgacagaagagagagagcac 82
||||||||||||||||||||||
Sbjct: 19 gttgacagaagagagagagcac 40
>40430_gma-MIR156f:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 gttgacagaagagagagagcac 82
||||||||||||||||||||||
Sbjct: 10 gttgacagaagagagagagcac 31
>40426_gma-MIR156b:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 gttgacagaagagagagagcac 82
||||||||||||||||||||||
Sbjct: 19 gttgacagaagagagagagcac 40
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 gttgacagaagagagagagcac 82
||||||||||||||||||||||
Sbjct: 20 gttgacagaagagagagagcac 41
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 gttgacagaagagagagagcac 82
||||||||||||||||||||||
Sbjct: 16 gttgacagaagagagagagcac 37
>40334_rco-MIR156e:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 gttgacagaagagagagagcac 82
||||||||||||||||||||||
Sbjct: 4 gttgacagaagagagagagcac 25
>41291_ptc-MIR156d:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 tgagttgacagaagagagagagcac 82
|||||||||||||||||| ||||||
Sbjct: 6 tgagttgacagaagagagtgagcac 30
>42687_zma-MIR156j:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 tgacagaagagagagagcac 82
||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcac 40
>42488_sbi-MIR156d:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 tgacagaagagagagagcac 82
||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcac 40
>41914_osa-MIR156k:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 tgacagaagagagagagcac 82
||||||||||||||||||||
Sbjct: 11 tgacagaagagagagagcac 30
>40648_mtr-MIR156:mirbase
Length = 460
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 tgacagaagagagagagcac 82
||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcac 40
>41909_osa-MIR156f:mirbase
Length = 186
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 60 agttgacagaagagagagagcac 82
|||||||||||||||| ||||||
Sbjct: 1 agttgacagaagagagtgagcac 23
>41568_vvi-MIR156h:mirbase
Length = 228
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 63 tgacagaagagagagagca 81
|||||||||||||||||||
Sbjct: 11 tgacagaagagagagagca 29
>40005_ath-MIR156d:mirbase
Length = 118
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 60 agttgacagaagagagagagcac 82
|||||||||||||||| ||||||
Sbjct: 15 agttgacagaagagagtgagcac 37
>39793_aly-MIR156d:mirbase
Length = 118
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 60 agttgacagaagagagagagcac 82
|||||||||||||||| ||||||
Sbjct: 14 agttgacagaagagagtgagcac 36
