miRNEST 2.0, an integrative microRNA resource :: BLAST
>42454_sof-MIR159c:mirbase
Length = 238
Score = 349 bits (176), Expect = 4e-97
Identities = 176/176 (100%)
Strand = Plus / Plus
Query: 1 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 103
Query: 61 gatgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 gatgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgac 163
Query: 121 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcct 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcct 219
>42495_sbi-MIR159b:mirbase
Length = 253
Score = 341 bits (172), Expect = 1e-94
Identities = 175/176 (99%)
Strand = Plus / Plus
Query: 1 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 118
Query: 61 gatgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgac 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 119 gatgcctctctggtgcagcaatgactgatgctcacctgcacttgcatgggtgtgcatgac 178
Query: 121 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcct 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcct 234
>42692_zma-MIR159c:mirbase
Length = 217
Score = 276 bits (139), Expect = 5e-75
Identities = 169/178 (94%), Gaps = 2/178 (1%)
Strand = Plus / Plus
Query: 1 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 80
Query: 61 gatgcctctctggtgcagcaatgactaatgctcac--ctgcacttgcatgggtgtgcatg 118
||| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||
Sbjct: 81 gatacctctctggtgcagcaatggccgctgctcacctctgcacttgcatgggtgtgcatg 140
Query: 119 acccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcct 176
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 acccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctcct 198
>42693_zma-MIR159d:mirbase
Length = 217
Score = 268 bits (135), Expect = 1e-72
Identities = 168/178 (94%), Gaps = 2/178 (1%)
Strand = Plus / Plus
Query: 1 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 60
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 21 aagagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatg 80
Query: 61 gatgcctctctggtgcagcaatgactaa--tgctcacctgcacttgcatgggtgtgcatg 118
||| ||||||||||||||||||| | | ||||||||||||||||||||||||||||||
Sbjct: 81 gatacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgtgcatg 140
Query: 119 acccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcct 176
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 acccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctcct 198
>41730_bdi-MIR159:mirbase
Length = 234
Score = 159 bits (80), Expect = 9e-40
Identities = 155/176 (88%), Gaps = 3/176 (1%)
Strand = Plus / Plus
Query: 1 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 28 aagagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcatg 87
Query: 61 gatgcctctctggtgca-gcaatg-actaatgctcacctgcacttgcatgggtgtgcatg 118
||| ||| ||||||||| ||| || |||| | | |||| ||||| ||| ||||||
Sbjct: 88 gatacctgtctggtgcatgcagtgtggtaatagcctgc-gcacctgcatcggtttgcatg 146
Query: 119 acccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 174
|||||||||||||||| ||| | ||||||||||||||||||||||||||||||||
Sbjct: 147 acccgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggagctc 202
>41922_osa-MIR159f:mirbase
Length = 188
Score = 131 bits (66), Expect = 2e-31
Identities = 146/172 (84%), Gaps = 8/172 (4%)
Strand = Plus / Plus
Query: 3 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 62
|||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatgga 72
Query: 63 tgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgaccc 122
| ||||| |||| ||| | | ||| ||||||||||||||| ||||||||||
Sbjct: 73 tacctctgcagtgc----atgtcgtaggct----tgcacttgcatgggtttgcatgaccc 124
Query: 123 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 174
|||||||||||||||||| |||| | || |||||||||||||||||||||
Sbjct: 125 gggagatgaacccaccattgtcttcctcttatgcttggattgaagggagctc 176
>41919_osa-MIR159c:mirbase
Length = 197
Score = 99.6 bits (50), Expect = 7e-22
Identities = 144/174 (82%), Gaps = 1/174 (0%)
Strand = Plus / Plus
Query: 3 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 62
||||||| ||||||||||| |||||| ||||||||| || ||||||||||| ||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtaggatgcagctgccgattcatgga 72
Query: 63 tgcctctctggtgca-gcaatgactaatgctcacctgcacttgcatgggtgtgcatgacc 121
| ||||| ||||| | | | | || ||||||||||||||||| |||||||||
Sbjct: 73 tacctctggagtgcatggcagcaatgctgtaggcctgcacttgcatgggtttgcatgacc 132
Query: 122 cgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcc 175
||||||||||||||||||| |||| | || || |||||||||||||||||||
Sbjct: 133 cgggagatgaacccaccattgtcttcctctattgattggattgaagggagctcc 186
>41920_osa-MIR159d:mirbase
Length = 189
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 3 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 62
||||||| ||||||||||| |||||| ||||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
Query: 63 tgcctct 69
| |||||
Sbjct: 73 tacctct 79
Score = 65.9 bits (33), Expect = 1e-11
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 95 cctgcacttgcatgggtgtgcatgacccgggagatgaacccaccatcatctttccctcgt 154
||||||||||||||||| ||||||||| |||||||||||| |||| | || | || |
Sbjct: 98 cctgcacttgcatgggtttgcatgacctgggagatgaacctgccattgtgttcctctatt 157
Query: 155 gcttggattgaagggagctcc 175
| |||||||||||||||||||
Sbjct: 158 gattggattgaagggagctcc 178
>41921_osa-MIR159e:mirbase
Length = 191
Score = 83.8 bits (42), Expect = 4e-17
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 aagagctccctt-cgatccaatccaggaggggaagtggtcggttgcagctgccggttcat 59
|||||||||||| ||||||||| |||||| ||||||||| || |||||||||||||||||
Sbjct: 11 aagagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttcat 70
Query: 60 ggatgcctct 69
|||| |||||
Sbjct: 71 ggatacctct 80
>41302_ptc-MIR159d:mirbase
Length = 194
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 cttggattgaagggagctcct 176
|||||||||||||||||||||
Sbjct: 165 cttggattgaagggagctcct 185
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 153 gtgcttggattgaagggagctcct 176
||||||||| ||||||||||||||
Sbjct: 172 gtgcttggactgaagggagctcct 195
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 153 gtgcttggattgaagggagctcct 176
||||||||| ||||||||||||||
Sbjct: 170 gtgcttggactgaagggagctcct 193
>40018_ath-MIR159c:mirbase
Length = 225
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 157 ttggattgaagggagctcct 176
||||||||||||||||||||
Sbjct: 196 ttggattgaagggagctcct 215
>39806_aly-MIR159c:mirbase
Length = 220
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 157 ttggattgaagggagctcct 176
||||||||||||||||||||
Sbjct: 198 ttggattgaagggagctcct 217
>39730_smo-MIR159:mirbase
Length = 279
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 156 cttggattgaagggagctcc 175
||||||||||||||||||||
Sbjct: 249 cttggattgaagggagctcc 268
>39424_pta-MIR319:mirbase
Length = 206
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 156 cttggattgaagggagctcc 175
||||||||||||||||||||
Sbjct: 27 cttggattgaagggagctcc 8
>39419_pta-MIR159c:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 156 cttggattgaagggagctcc 175
||||||||||||||||||||
Sbjct: 49 cttggattgaagggagctcc 68
>39417_pta-MIR159a:mirbase
Length = 210
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 156 cttggattgaagggagctcc 175
||||||||||||||||||||
Sbjct: 184 cttggattgaagggagctcc 203
