miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42650_tae-MIR1117:mirbase
Length = 118
Score = 234 bits (118), Expect = 1e-62
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 1 gtttgaaaatgggacctttagtaccggttcgtggcacgaaccgggactaaaggtcttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttgaaaatgggacctttagtaccggttcgtggcacgaaccgggactaaaggtcttcaa 60
Query: 61 ccccattagttccggttcgtgccacaaaccgcgactaaaagggaggagctttagtcgc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccccattagttccggttcgtgccacaaaccgcgactaaaagggaggagctttagtcgc 118
Score = 46.1 bits (23), Expect = 6e-06
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 25 cggttcgtggcacgaaccgggactaaaggtcttcaaccccattagttccggttcgtgcca 84
||||| |||||||||||||| ||||| || || || || ||||| |||||||||||||
Sbjct: 91 cggtttgtggcacgaaccggaactaatggggttgaagacctttagtcccggttcgtgcca 32
Query: 85 caaaccg 91
| |||||
Sbjct: 31 cgaaccg 25
>42664_tae-MIR1131:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 18 ttagtaccggttcgtggcacgaaccgggactaaaggt 54
||||||||||||| ||||||||||||| ||||||||
Sbjct: 59 ttagtaccggttcctggcacgaaccggtgctaaaggt 23
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 14 acctttagtaccggttcgtggcacgaaccgggactaa 50
|||||||| ||||||||||| || ||||||| |||||
Sbjct: 23 acctttagcaccggttcgtgccaggaaccggtactaa 59
