miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42656_tae-MIR1123:mirbase
Length = 218
Score = 363 bits (183), Expect = e-101
Identities = 197/204 (96%)
Strand = Plus / Plus
Query: 8 ttatatgagaccaggtctcatataaatcaggtgagacccgccctgatgaatgacatgtgg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 ttatatgagaccaggtctcatataaatcaggtgagacccgccctgatgaatgacatgtgg 67
Query: 68 aattcacaaatcacaaagcatctaatctctnnnnnnntgatttcaggtggggggtggggt 127
|||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 68 aattcacaaatcacaaagcatctaatctctccccccctgatttcaggtggggggtggggt 127
Query: 128 ggatgctttgtgatttgtgaatgacacgtgtcatccatcaggatgggtctcacctgctaa 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggatgctttgtgatttgtgaatgacacgtgtcatccatcaggatgggtctcacctgctaa 187
Query: 188 tccgtgagacctggtctcatagaa 211
||||||||||||||||||||||||
Sbjct: 188 tccgtgagacctggtctcatagaa 211
Score = 61.9 bits (31), Expect = 2e-10
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 129 gatgctttgtgatttgtgaatgacacgtgtcatccatcaggatgggtctcacctg 183
||||||||||||||||||||| ||| |||||| ||||||| ||||||||||||
Sbjct: 89 gatgctttgtgatttgtgaattccacatgtcattcatcagggcgggtctcacctg 35
Score = 61.9 bits (31), Expect = 2e-10
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 35 caggtgagacccgccctgatgaatgacatgtggaattcacaaatcacaaagcatc 89
|||||||||||| ||||||| |||||| ||| |||||||||||||||||||||
Sbjct: 183 caggtgagacccatcctgatggatgacacgtgtcattcacaaatcacaaagcatc 129
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 8 ttatatgagaccaggtctcatataa 32
|||||||||||| ||||||||||||
Sbjct: 32 ttatatgagacctggtctcatataa 8
