miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42667_tae-MIR1134:mirbase
Length = 180
Score = 226 bits (114), Expect = 5e-60
Identities = 158/180 (87%)
Strand = Plus / Plus
Query: 1 ccacgcgtccggcattcttcttcttcttgttgttgttgttgtaatggatttnnnnnnnnn 60
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccacgcgtccggcattcttcttcttcttgttgttgttgttgtaatggatttggaggagga 60
Query: 61 nnnnnnnnnnnnnctgctgttgatgctcctagtacaacaaataaggaggcggcggaggag 120
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaggaggaggagctgctgttgatgctcctagtacaacaaataaggaggcggcggaggag 120
Query: 121 gagcaacaacaacaagaagaagaagatttgggcttgaagctgcagctgcaacaacatgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcaacaacaacaagaagaagaagatttgggcttgaagctgcagctgcaacaacatgta 180
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 124 caacaacaacaagaagaagaaga 146
|||||||||||||||||||||||
Sbjct: 38 caacaacaacaagaagaagaaga 16
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 tcttcttcttcttgttgttgttg 38
|||||||||||||||||||||||
Sbjct: 146 tcttcttcttcttgttgttgttg 124
>41880_far-MIR1134:mirbase
Length = 240
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 19 tcttcttcttgttgttgttgt 39
|||||||||||||||||||||
Sbjct: 135 tcttcttcttgttgttgttgt 115
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 124 caacaacaacaagaagaaga 143
||||||||||||||||||||
Sbjct: 116 caacaacaacaagaagaaga 135
