miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>42670_tae-MIR1137:mirbase
          Length = 148

 Score =  293 bits (148), Expect = 2e-80
 Identities = 148/148 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacgatgacgacgattacatagccttgtactccctccgttccaaaatggatgacccaagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cacgatgacgacgattacatagccttgtactccctccgttccaaaatggatgacccaagt 60

                                                                       
Query: 61  ttgtactaaagttagtacaaagttgagtcatctattctggaacggagggagtagtagtaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttgtactaaagttagtacaaagttgagtcatctattctggaacggagggagtagtagtaa 120

                                       
Query: 121 tacaacgttgctagtgataaggaaaatc 148
           ||||||||||||||||||||||||||||
Sbjct: 121 tacaacgttgctagtgataaggaaaatc 148



 Score = 91.7 bits (46), Expect = 1e-19
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                       
Query: 28  tactccctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgag 87
           |||||||||||||||| ||| |||||| ||| ||||||||||  |||||||||| ||| |
Sbjct: 113 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaacttggg 54

                                     
Query: 88  tcatctattctggaacggagggagta 113
           ||||| ||| ||||||||||||||||
Sbjct: 53  tcatccattttggaacggagggagta 28