miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42672_tae-MIR1139:mirbase
Length = 216
Score = 426 bits (214), Expect = e-120
Identities = 216/216 (100%)
Strand = Plus / Plus
Query: 1 gccacagtggagagtaacatacactagtaacatacacatatccctagaactatataacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccacagtggagagtaacatacactagtaacatacacatatccctagaactatataacta 60
Query: 61 ccttcatagkggtagcaacataagtgtggtatcatgcaaagcttcatttattaggttata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccttcatagkggtagcaacataagtgtggtatcatgcaaagcttcatttattaggttata 120
Query: 121 gactcatattgcattgggacatgtgatgttatagtaactagctaagttactcaaactacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gactcatattgcattgggacatgtgatgttatagtaactagctaagttactcaaactacc 180
Query: 181 tctctcctcgatgttactattgaagttactcccact 216
||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctctcctcgatgttactattgaagttactcccact 216
>41812_bdi-MIR1139:mirbase
Length = 120
Score = 54.2 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 3 cacagtggagagtaacatacactagtaacat 33
|||||||| ||||||||||||||||||||||
Sbjct: 53 cacagtggcgagtaacatacactagtaacat 83
