miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41032_vun-MIR1507a:mirbase
Length = 109
Score = 174 bits (88), Expect = 9e-45
Identities = 102/109 (93%)
Strand = Plus / Plus
Query: 1 gtagtatttggcagaggtgtatggagtgagagaagggaaaaacgcctttgccgatctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtagtatttggcagaggtgtatggagtgagagaagggaaaaacgcctttgccgatctcat 60
Query: 61 cggttcnnnnnnncctctctcattccatacatcgtctgacgaacgtagc 109
|||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggttctttttttcctctctcattccatacatcgtctgacgaacgtagc 109
>41033_vun-MIR1507b:mirbase
Length = 109
Score = 167 bits (84), Expect = 2e-42
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 1 gtagtatttggcagaggtgtatggagtgagagaagggaaaaacgcctttgccgatctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 gtagtatttggcagaggtgtatggagtgagagaagggaaaaacgcctttcccgatctcat 60
Query: 61 cggttcnnnnnnncctctctcattccatacatcgtctgacgaacgtagc 109
|||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggttctttctttcctctctcattccatacatcgtctgacgaacgtagc 109
>40483_gma-MIR1507a:mirbase
Length = 107
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 7 tttggcagaggtgtatggagtgagagaagggaaa 40
||||||||||||||||||||||||||||||||||
Sbjct: 6 tttggcagaggtgtatggagtgagagaagggaaa 39
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 74 cctctctcattccatacatcgtctgacgaacgta 107
||||||||||||||||||||||||||||||||||
Sbjct: 72 cctctctcattccatacatcgtctgacgaacgta 105
>40636_gso-MIR1507b:mirbase
Length = 98
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 74 cctctctcattccatacatcgtctgacgaac 104
|||||||||||||||||||||||||||||||
Sbjct: 68 cctctctcattccatacatcgtctgacgaac 98
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 7 tttggcagaggtgtatggagtgagagaagggaaa 40
|||| ||||| |||||||||||||||||||||||
Sbjct: 2 tttgacagagatgtatggagtgagagaagggaaa 35
>40635_gso-MIR1507a:mirbase
Length = 98
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 74 cctctctcattccatacatcgtctgacgaac 104
|||||||||||||||||||||||||||||||
Sbjct: 68 cctctctcattccatacatcgtctgacgaac 98
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 7 tttggcagaggtgtatggagtgagagaagggaaa 40
|||| |||||||||||||||||||||||||||||
Sbjct: 2 tttgtcagaggtgtatggagtgagagaagggaaa 35
>40484_gma-MIR1507b:mirbase
Length = 98
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 74 cctctctcattccatacatcgtctgacgaac 104
|||||||||||||||||||||||||||||||
Sbjct: 68 cctctctcattccatacatcgtctgacgaac 98
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 7 tttggcagaggtgtatggagtgagagaagggaaa 40
|||| ||||| |||||||||||||||||||||||
Sbjct: 2 tttgacagagatgtatggagtgagagaagggaaa 35