miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41033_vun-MIR1507b:mirbase
Length = 109
Score = 216 bits (109), Expect = 3e-57
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1 gtagtatttggcagaggtgtatggagtgagagaagggaaaaacgcctttcccgatctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtagtatttggcagaggtgtatggagtgagagaagggaaaaacgcctttcccgatctcat 60
Query: 61 cggttctttctttcctctctcattccatacatcgtctgacgaacgtagc 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggttctttctttcctctctcattccatacatcgtctgacgaacgtagc 109
>41032_vun-MIR1507a:mirbase
Length = 109
Score = 200 bits (101), Expect = 1e-52
Identities = 107/109 (98%)
Strand = Plus / Plus
Query: 1 gtagtatttggcagaggtgtatggagtgagagaagggaaaaacgcctttcccgatctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 gtagtatttggcagaggtgtatggagtgagagaagggaaaaacgcctttgccgatctcat 60
Query: 61 cggttctttctttcctctctcattccatacatcgtctgacgaacgtagc 109
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggttctttttttcctctctcattccatacatcgtctgacgaacgtagc 109
>40483_gma-MIR1507a:mirbase
Length = 107
Score = 81.8 bits (41), Expect = 1e-16
Identities = 87/101 (86%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 7 tttggcagaggtgtatggagtgagagaagggaaaaacgcctttcccgatctcatcggttc 66
|||||||||||||||||||||||||||||||||| | ||| ||||| ||| | |
Sbjct: 6 tttggcagaggtgtatggagtgagagaagggaaagg-gtattttccgattctgtcgttac 64
Query: 67 tttctttcctctctcattccatacatcgtctgacgaacgta 107
| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 65 tctcttccctctctcattccatacatcgtctgacgaacgta 105
>40636_gso-MIR1507b:mirbase
Length = 98
Score = 75.8 bits (38), Expect = 6e-15
Identities = 84/98 (85%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 7 tttggcagaggtgtatggagtgagagaagggaaaaacgcctttcccgatctcatcggttc 66
|||| ||||| ||||||||||||||||||||||| ||||| |||| ||||| | |
Sbjct: 2 tttgacagagatgtatggagtgagagaagggaaatgatattttcc-gatcccatcgttac 60
Query: 67 tttctttcctctctcattccatacatcgtctgacgaac 104
| |||| |||||||||||||||||||||||||||||||
Sbjct: 61 tctcttccctctctcattccatacatcgtctgacgaac 98
>40484_gma-MIR1507b:mirbase
Length = 98
Score = 75.8 bits (38), Expect = 6e-15
Identities = 84/98 (85%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 7 tttggcagaggtgtatggagtgagagaagggaaaaacgcctttcccgatctcatcggttc 66
|||| ||||| ||||||||||||||||||||||| ||||| |||| ||||| | |
Sbjct: 2 tttgacagagatgtatggagtgagagaagggaaatgatattttcc-gatcccatcgttac 60
Query: 67 tttctttcctctctcattccatacatcgtctgacgaac 104
| |||| |||||||||||||||||||||||||||||||
Sbjct: 61 tctcttccctctctcattccatacatcgtctgacgaac 98
>40635_gso-MIR1507a:mirbase
Length = 98
Score = 67.9 bits (34), Expect = 1e-12
Identities = 83/98 (84%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 7 tttggcagaggtgtatggagtgagagaagggaaaaacgcctttcccgatctcatcggttc 66
|||| ||||||||||||||||||||||||||||| | ||| ||||| ||| | |
Sbjct: 2 tttgtcagaggtgtatggagtgagagaagggaaagg-gtattttccgattctgtcgttac 60
Query: 67 tttctttcctctctcattccatacatcgtctgacgaac 104
| |||| |||||||||||||||||||||||||||||||
Sbjct: 61 tctcttccctctctcattccatacatcgtctgacgaac 98
