miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41673_vvi-MIR399f:mirbase
Length = 107
Score = 212 bits (107), Expect = 4e-56
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 1 gttgcattagagggccaaatctgctttggcatgaagcccatttagcaggctcgtctgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgcattagagggccaaatctgctttggcatgaagcccatttagcaggctcgtctgtgt 60
Query: 61 ctgcagtcttctcgctgccgaaggagatttgtcctgcaattcttctg 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgcagtcttctcgctgccgaaggagatttgtcctgcaattcttctg 107
>41672_vvi-MIR399e:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 75 ctgccgaaggagatttgtcctgcaattcttct 106
||||| ||||||||||| || |||||||||||
Sbjct: 81 ctgccaaaggagatttgcccggcaattcttct 112
>41457_ptc-MIR399j:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 75 ctgccgaaggagatttgtcctgcaattcttct 106
||||| |||||||||||||| |||| ||||||
Sbjct: 81 ctgccaaaggagatttgtccggcaaatcttct 112
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 71 ctcgctgccgaaggagatttgtcctgcaattc 102
||||||||| ||||||||||| || |||||||
Sbjct: 86 ctcgctgccaaaggagatttgccccgcaattc 117
>40092_ath-MIR399a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 75 ctgccgaaggagatttgtcctgcaattcttct 106
||||| ||||||||||| |||| |||||||||
Sbjct: 92 ctgccaaaggagatttgccctgtaattcttct 123
