miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41696_vvi-MIR845d:mirbase
Length = 131
Score = 260 bits (131), Expect = 2e-70
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 1 ataaccaacattaattatccctagggccatgggataaacaaaaactctgcaaaaccaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaccaacattaattatccctagggccatgggataaacaaaaactctgcaaaaccaagt 60
Query: 61 tagcacaccctagaatggttctagcacaattactaacctatggctctgataccaattgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagcacaccctagaatggttctagcacaattactaacctatggctctgataccaattgat 120
Query: 121 gggaaaaacct 131
|||||||||||
Sbjct: 121 gggaaaaacct 131
>41697_vvi-MIR845e:mirbase
Length = 131
Score = 202 bits (102), Expect = 5e-53
Identities = 117/122 (95%)
Strand = Plus / Plus
Query: 8 acattaattatccctagggccatgggataaacaaaaactctgcaaaaccaagttagcaca 67
|||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||
Sbjct: 8 acattaattatccctagggccatgggataaacaaaaaccttgaaaaaacaagttagcaca 67
Query: 68 ccctagaatggttctagcacaattactaacctatggctctgataccaattgatgggaaaa 127
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ccctagaatggttctagcacgattactaacctatggctctgataccaattgatgggaaaa 127
Query: 128 ac 129
||
Sbjct: 128 ac 129
>41695_vvi-MIR845c:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 ggctctgataccaattgatg 121
||||||||||||||||||||
Sbjct: 61 ggctctgataccaattgatg 80
>40169_ath-MIR845a:mirbase
Length = 163
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 ggctctgataccaattgatg 121
||||||||||||||||||||
Sbjct: 93 ggctctgataccaattgatg 112
