miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42741_zma-MIR168a:mirbase
Length = 104
Score = 206 bits (104), Expect = 2e-54
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1 gaagccgcgccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagccgcgccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacggg 60
Query: 61 acggatcccgccttgcaccaagtgaatcggagccggcggagcga 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acggatcccgccttgcaccaagtgaatcggagccggcggagcga 104
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 4 gccgcgccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccgcgccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacg 60
Query: 64 gatcccgccttgcaccaagtgaatcggagccggcg 98
|||||||||||||||||||||||||||||||||||
Sbjct: 61 gatcccgccttgcaccaagtgaatcggagccggcg 95
>42459_sof-MIR168a:mirbase
Length = 104
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 4 gccgcgccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gccgcgccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacg 63
Query: 64 gatcccgccttgcaccaagtgaatcggagccggcg 98
|||||||||||||||||||||||||||||||||||
Sbjct: 64 gatcccgccttgcaccaagtgaatcggagccggcg 98
>42742_zma-MIR168b:mirbase
Length = 104
Score = 176 bits (89), Expect = 2e-45
Identities = 98/101 (97%)
Strand = Plus / Plus
Query: 4 gccgcgccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacg 63
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gccgcgccgtctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacg 63
Query: 64 gatcccgccttgcaccaagtgaatcggagccggcggagcga 104
|||||||||||||| |||||||||||||||||||| |||||
Sbjct: 64 gatcccgccttgcatcaagtgaatcggagccggcgcagcga 104
>42460_sof-MIR168b:mirbase
Length = 103
Score = 147 bits (74), Expect = 2e-36
Identities = 81/82 (98%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 17 gggctcgcttggtgcagatcgggacccgccgcccggccgacgggacggatcccgccttgc 76
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gggctcgcttgg-gcagatcgggacccgccgcccggccgacgggacggatcccgccttgc 75
Query: 77 accaagtgaatcggagccggcg 98
||||||||||||||||||||||
Sbjct: 76 accaagtgaatcggagccggcg 97
>41888_hvu-MIR168:mirbase
Length = 106
Score = 145 bits (73), Expect = 7e-36
Identities = 92/97 (94%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 8 cgccgcctcgggctcgcttggtgcagatcgggacccgccgcccggcc-gacgggacggat 66
|||||||||||||||||||||||||||||||||||| ||||||| || |||||| |||||
Sbjct: 10 cgccgcctcgggctcgcttggtgcagatcgggaccctccgcccgccccgacgggccggat 69
Query: 67 cccgccttgcaccaagtgaatcggagccggcggagcg 103
|||||||||||||||||||||||||||||||| ||||
Sbjct: 70 cccgccttgcaccaagtgaatcggagccggcgcagcg 106
>41887_hvu-MIR168:mirbase
Length = 106
Score = 145 bits (73), Expect = 7e-36
Identities = 92/97 (94%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 8 cgccgcctcgggctcgcttggtgcagatcgggacccgccgcccggcc-gacgggacggat 66
|||||||||||||||||||||||||||||||||||| ||||||| || |||||| |||||
Sbjct: 10 cgccgcctcgggctcgcttggtgcagatcgggaccctccgcccgccccgacgggccggat 69
Query: 67 cccgccttgcaccaagtgaatcggagccggcggagcg 103
|||||||||||||||||||||||||||||||| ||||
Sbjct: 70 cccgccttgcaccaagtgaatcggagccggcgcagcg 106
>41753_bdi-MIR168:mirbase
Length = 136
Score = 135 bits (68), Expect = 7e-33
Identities = 92/99 (92%), Gaps = 2/99 (2%)
Strand = Plus / Plus
Query: 8 cgccgcctcgggctcgcttggtgcagatcgggacccgccgcccg--gccgacgggacgga 65
|||||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||||
Sbjct: 18 cgccgcctcgggctcgcttggtgcagatcgggaccctccgcccgcccccgccgggccgga 77
Query: 66 tcccgccttgcaccaagtgaatcggagccggcggagcga 104
||||||||||||||||||||||||||||||||| |||||
Sbjct: 78 tcccgccttgcaccaagtgaatcggagccggcgcagcga 116
>42528_sbi-MIR168:mirbase
Length = 106
Score = 119 bits (60), Expect = 4e-28
Identities = 87/95 (91%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 4 gccgcgccgcctcgggctcgcttggtgcagatcgggacccgccgcccgg--ccgacggga 61
||||||||||||||||||||||||||||||||||||||| |||||| | | |||||||
Sbjct: 4 gccgcgccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacggga 63
Query: 62 cggatcccgccttgcaccaagtgaatcggagccgg 96
| ||||||||||||||||||||||||| |||||||
Sbjct: 64 cagatcccgccttgcaccaagtgaatccgagccgg 98
>41962_osa-MIR168a:mirbase
Length = 87
Score = 109 bits (55), Expect = 4e-25
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 11 cgcctcgggctcgcttggtgcagatcgggacccgccgcc-cggccgac-gggacggatcc 68
||||||||||||||||||||||||||||||||||||||| | || | | ||| |||||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
Query: 69 cgccttgcaccaagtgaatcggagccg 95
|||||||||||||||||||||||||||
Sbjct: 61 cgccttgcaccaagtgaatcggagccg 87
>41961_osa-MIR168a:mirbase
Length = 87
Score = 109 bits (55), Expect = 4e-25
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 11 cgcctcgggctcgcttggtgcagatcgggacccgccgcc-cggccgac-gggacggatcc 68
||||||||||||||||||||||||||||||||||||||| | || | | ||| |||||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
Query: 69 cgccttgcaccaagtgaatcggagccg 95
|||||||||||||||||||||||||||
Sbjct: 61 cgccttgcaccaagtgaatcggagccg 87
>41596_vvi-MIR168:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 64 gatcccgccttgcaccaagtgaatcggagccggc 97
|||||||||||||| ||| |||||||||| ||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggagacggc 132
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 ggatcccgccttgcaccaagtgaatcggag 92
||||||||||||||| ||| ||||||||||
Sbjct: 106 ggatcccgccttgcatcaactgaatcggag 135
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 ggatcccgccttgcaccaagtgaatcggag 92
||||||||||||||| ||| ||||||||||
Sbjct: 130 ggatcccgccttgcatcaactgaatcggag 159
>41215_crt-MIR168:mirbase
Length = 201
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 ggatcccgccttgcaccaagtgaatcggag 92
||||||||||||||| ||| ||||||||||
Sbjct: 139 ggatcccgccttgcatcaactgaatcggag 168
>41210_ccl-MIR168:mirbase
Length = 176
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 ggatcccgccttgcaccaagtgaatcggag 92
||||||||||||||| ||| ||||||||||
Sbjct: 138 ggatcccgccttgcatcaactgaatcggag 167
>41101_tcc-MIR168:mirbase
Length = 167
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 ggatcccgccttgcaccaagtgaatcggag 92
||||||||||||||| ||| ||||||||||
Sbjct: 123 ggatcccgccttgcatcaactgaatcggag 152
>40448_gma-MIR168:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 ggatcccgccttgcaccaagtgaatcggag 92
||||||||||||||| ||| ||||||||||
Sbjct: 84 ggatcccgccttgcatcaactgaatcggag 113
>40043_ath-MIR168a:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 63 ggatcccgccttgcaccaagtgaatcgga 91
||||||||||||||| ||| |||||||||
Sbjct: 99 ggatcccgccttgcatcaactgaatcgga 127
>39832_aly-MIR168a:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 63 ggatcccgccttgcaccaagtgaatcgga 91
||||||||||||||| ||| |||||||||
Sbjct: 105 ggatcccgccttgcatcaactgaatcgga 133
