miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42744_zma-MIR169b:mirbase
Length = 156
Score = 309 bits (156), Expect = 3e-85
Identities = 156/156 (100%)
Strand = Plus / Plus
Query: 1 taggctcggggactacggtgcagccaaggatgacttgccgatctatcgtcgatcaacgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taggctcggggactacggtgcagccaaggatgacttgccgatctatcgtcgatcaacgag 60
Query: 61 cgacgcctctgatgtctgatctcgacatctatcgtcgtcagaccatcatcatctatcggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgacgcctctgatgtctgatctcgacatctatcgtcgtcagaccatcatcatctatcggc 120
Query: 121 aagttgttcttggctacaccgtggctcctgctcctg 156
||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagttgttcttggctacaccgtggctcctgctcctg 156
>42743_zma-MIR169a:mirbase
Length = 130
Score = 83.8 bits (42), Expect = 4e-17
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 115 atcggcaagttgttcttggctacaccgtggctcctgctcctg 156
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 atcggcaagttgttcttggctacaccgtggctcctgctcctg 130
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 1 taggctcggggactacggtgcagccaaggatgacttgccgatc 43
||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 taggctcggggactatggtgcagccaaggatgacttgccgatc 43
>41964_osa-MIR169a:mirbase
Length = 173
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 17 ggtgcagccaaggatgacttgccgatctatcg 48
||||||||||||||||||||||||||| ||||
Sbjct: 34 ggtgcagccaaggatgacttgccgatcgatcg 65
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 118 ggcaagttgttcttggctacaccgtggctcctgctcct 155
||||||||||||||||||||| | |||| |||||||||
Sbjct: 114 ggcaagttgttcttggctacatcttggcccctgctcct 151
>41603_vvi-MIR169g:mirbase
Length = 121
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 ggtgcagccaaggatgacttgccga 41
|||||||||||||||||||||||||
Sbjct: 9 ggtgcagccaaggatgacttgccga 33
>41602_vvi-MIR169f:mirbase
Length = 184
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 ggtgcagccaaggatgacttgccga 41
|||||||||||||||||||||||||
Sbjct: 9 ggtgcagccaaggatgacttgccga 33
>41106_tcc-MIR169e:mirbase
Length = 147
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 gtgcagccaaggatgacttgccgat 42
|||||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccgat 42
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 115 atcggcaagttgttcttggctaca 138
||||||||||||| ||||||||||
Sbjct: 106 atcggcaagttgtccttggctaca 129
>41104_tcc-MIR169c:mirbase
Length = 142
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 ggtgcagccaaggatgacttgccga 41
|||||||||||||||||||||||||
Sbjct: 17 ggtgcagccaaggatgacttgccga 41
>41102_tcc-MIR169a:mirbase
Length = 147
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 gtgcagccaaggatgacttgccgat 42
|||||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccgat 42
>40273_bna-MIR169b:mirbase
Length = 188
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 gtgcagccaaggatgacttgccgat 42
|||||||||||||||||||||||||
Sbjct: 15 gtgcagccaaggatgacttgccgat 39
>40272_bna-MIR169a:mirbase
Length = 132
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 gtgcagccaaggatgacttgccgat 42
|||||||||||||||||||||||||
Sbjct: 16 gtgcagccaaggatgacttgccgat 40
>40045_ath-MIR169a:mirbase
Length = 226
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 gtgcagccaaggatgacttgccgat 42
|||||||||||||||||||||||||
Sbjct: 15 gtgcagccaaggatgacttgccgat 39
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 115 atcggcaagttgttcttggctacac 139
||||||||||||| |||||||||||
Sbjct: 187 atcggcaagttgtccttggctacac 211
>39834_aly-MIR169a:mirbase
Length = 263
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 gtgcagccaaggatgacttgccgat 42
|||||||||||||||||||||||||
Sbjct: 24 gtgcagccaaggatgacttgccgat 48
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 115 atcggcaagttgttcttggctacac 139
||||||||||||| |||||||||||
Sbjct: 213 atcggcaagttgtccttggctacac 237
>42529_sbi-MIR169a:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 21 cagccaaggatgacttgccgatctatcg 48
||||||||||||||||||||||| ||||
Sbjct: 1 cagccaaggatgacttgccgatcgatcg 28
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 116 tcggcaagttgttcttggcta 136
|||||||||||||||||||||
Sbjct: 71 tcggcaagttgttcttggcta 91
>41619_vvi-MIR169w:mirbase
Length = 143
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 ggtgcagccaaggatgacttgccg 40
||||||||||||||||||||||||
Sbjct: 9 ggtgcagccaaggatgacttgccg 32
>41536_sly-MIR169c:mirbase
Length = 147
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 gtgcagccaaggatgacttgccga 41
||||||||||||||||||||||||
Sbjct: 38 gtgcagccaaggatgacttgccga 61
>41360_ptc-MIR169f:mirbase
Length = 239
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 ggtgcagccaaggatgacttgccg 40
||||||||||||||||||||||||
Sbjct: 7 ggtgcagccaaggatgacttgccg 30
>41112_tcc-MIR169k:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 ggtgcagccaaggatgacttgccg 40
||||||||||||||||||||||||
Sbjct: 17 ggtgcagccaaggatgacttgccg 40
>40450_gma-MIR169b:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccgat 42
||||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccgat 32
>41607_vvi-MIR169k:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 gtgcagccaaggatgacttgccg 40
|||||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccg 32
>41606_vvi-MIR169j:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 gtgcagccaaggatgacttgccg 40
|||||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccg 32
>41357_ptc-MIR169c:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccga 41
|||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccga 31
>41356_ptc-MIR169b:mirbase
Length = 113
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccga 41
|||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccga 31
>41349_ptc-MIR169a:mirbase
Length = 165
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccga 41
|||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccga 31
>41113_tcc-MIR169l:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 gtgcagccaaggatgacttgccg 40
|||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccg 40
>40687_mtr-MIR169j:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 gtgcagccaaggatgacttgccg 40
|||||||||||||||||||||||
Sbjct: 3 gtgcagccaaggatgacttgccg 25
>40679_mtr-MIR169b:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccga 41
|||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccga 41
>40678_mtr-MIR169a:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccga 41
|||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccga 41
>42745_zma-MIR169c:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40
>41979_osa-MIR169p:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 118 tgcagccaaggatgacttgccg 97
>41966_osa-MIR169c:mirbase
Length = 112
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccg 30
>41965_osa-MIR169b:mirbase
Length = 128
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccg 30
>41758_bdi-MIR169f:mirbase
Length = 151
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 31 tgcagccaaggatgacttgccg 52
>41755_bdi-MIR169c:mirbase
Length = 151
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 31 tgcagccaaggatgacttgccg 52
>41615_vvi-MIR169s:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32
>41599_vvi-MIR169c:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32
>41597_vvi-MIR169a:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32
>41534_sly-MIR169a:mirbase
Length = 149
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 39 tgcagccaaggatgacttgccg 60
>41380_ptc-MIR169z:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 117 cggcaagttgttcttggctaca 138
||||||||||||||||||||||
Sbjct: 91 cggcaagttgttcttggctaca 112
>41361_ptc-MIR169g:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccg 30
>41358_ptc-MIR169d:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccg 30
>41176_aqc-MIR169c:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 3 tgcagccaaggatgacttgccg 24
>41103_tcc-MIR169b:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40
>40684_mtr-MIR169g:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 4 tgcagccaaggatgacttgccg 25
>40449_gma-MIR169a:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40
>40357_rco-MIR169b:mirbase
Length = 93
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 117 cggcaagttgttcttggctaca 138
||||||||||||||||||||||
Sbjct: 67 cggcaagttgttcttggctaca 88
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 cagccaaggatgacttgccg 40
||||||||||||||||||||
Sbjct: 6 cagccaaggatgacttgccg 25
>40046_ath-MIR169b:mirbase
Length = 181
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 41 tgcagccaaggatgacttgccg 62
>39835_aly-MIR169b:mirbase
Length = 173
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgcagccaaggatgacttgccg 40
||||||||||||||||||||||
Sbjct: 44 tgcagccaaggatgacttgccg 65
>42760_zma-MIR169r:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 gcagccaaggatgacttgccg 40
|||||||||||||||||||||
Sbjct: 1 gcagccaaggatgacttgccg 21
>41359_ptc-MIR169e:mirbase
Length = 166
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 gcagccaaggatgacttgccg 40
|||||||||||||||||||||
Sbjct: 10 gcagccaaggatgacttgccg 30
>40049_ath-MIR169e:mirbase
Length = 217
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 agccaaggatgacttgccgat 42
|||||||||||||||||||||
Sbjct: 71 agccaaggatgacttgccgat 91
>40048_ath-MIR169d:mirbase
Length = 154
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 agccaaggatgacttgccgat 42
|||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccgat 63
>39837_aly-MIR169d:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 agccaaggatgacttgccgat 42
|||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccgat 63
>42539_sbi-MIR169k:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 cagccaaggatgacttgccg 40
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>42530_sbi-MIR169b:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 cagccaaggatgacttgccg 40
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>41373_ptc-MIR169s:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 cagccaaggatgacttgccg 40
||||||||||||||||||||
Sbjct: 12 cagccaaggatgacttgccg 31
>41362_ptc-MIR169h:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 cagccaaggatgacttgccg 40
||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccg 30
>40451_gma-MIR169c:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 agccaaggatgacttgccga 41
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccga 31
>40356_rco-MIR169a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 cagccaaggatgacttgccg 40
||||||||||||||||||||
Sbjct: 6 cagccaaggatgacttgccg 25
>40047_ath-MIR169c:mirbase
Length = 411
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 cagccaaggatgacttgccg 40
||||||||||||||||||||
Sbjct: 113 cagccaaggatgacttgccg 132
>39838_aly-MIR169e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 agccaaggatgacttgccga 41
||||||||||||||||||||
Sbjct: 53 agccaaggatgacttgccga 72
>39836_aly-MIR169c:mirbase
Length = 292
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 cagccaaggatgacttgccg 40
||||||||||||||||||||
Sbjct: 45 cagccaaggatgacttgccg 64
