miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39450_pta-MIR1315:mirbase
          Length = 192

 Score =  157 bits (79), Expect = 4e-39
 Identities = 151/175 (86%)
 Strand = Plus / Minus

                                                                       
Query: 4   gactcggttgggaacctgacgggcctccaaacgcttgacttgcgcgggtgctccactctg 63
           |||||||||||||||||||| ||||||||||  |||||| ||   | |||||||| ||||
Sbjct: 183 gactcggttgggaacctgacaggcctccaaatccttgacctggaagagtgctccagtctg 124

                                                                       
Query: 64  cagacgttcccagactcggttgggaacctgacgggcctccaaacgcttgacttgagctgg 123
           |||| | |||| |||||||||||||||||||| ||||||||||  |||| | || |||||
Sbjct: 123 cagatggtcccggactcggttgggaacctgaccggcctccaaagccttgtcctgggctgg 64

                                                                  
Query: 124 tggtccactctgcagacgctcccagactcggttggaaacctgacgggcctccaaa 178
           || |||| |||||||| | |||| ||||||||||| |||||||||||||||||||
Sbjct: 63  tgctccagtctgcagatggtcccggactcggttgggaacctgacgggcctccaaa 9



 Score = 79.8 bits (40), Expect = 7e-16
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                       
Query: 71  tcccagactcggttgggaacctgacgggcctccaaacgcttgacttgagctggtggtcca 130
           |||| |||||||||||||||||||| ||||||||||  |||||| ||     ||| ||||
Sbjct: 188 tcccggactcggttgggaacctgacaggcctccaaatccttgacctggaagagtgctcca 129

                                                           
Query: 131 ctctgcagacgctcccagactcggttggaaacctgacgggcctccaaa 178
            |||||||| | |||| ||||||||||| |||||||| ||||||||||
Sbjct: 128 gtctgcagatggtcccggactcggttgggaacctgaccggcctccaaa 81




>39412_pab-MIR3710:mirbase
          Length = 135

 Score =  107 bits (54), Expect = 3e-24
 Identities = 93/106 (87%)
 Strand = Plus / Plus

                                                                       
Query: 73  ccagactcggttgggaacctgacgggcctccaaacgcttgacttgagctggtggtccact 132
           ||||||||||||||||||||||||||||||||||  ||| || | | ||  || ||| | 
Sbjct: 9   ccagactcggttgggaacctgacgggcctccaaagtcttaaccttatctattgctccgcc 68

                                                         
Query: 133 ctgcagacgctcccagactcggttggaaacctgacgggcctccaaa 178
           ||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 69  ctgcagacgcttccagactcggttgggaacctgacgggcctccaaa 114



 Score = 99.6 bits (50), Expect = 7e-22
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccagactcggttgggaacctgacgggcctccaaacgcttgacttgcgcgggtgctccact 60
           ||||||||||||||||||||||||||||||||||  ||| || |   |   |||||| | 
Sbjct: 9   ccagactcggttgggaacctgacgggcctccaaagtcttaaccttatctattgctccgcc 68

                                                         
Query: 61  ctgcagacgttcccagactcggttgggaacctgacgggcctccaaa 106
           ||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 69  ctgcagacgcttccagactcggttgggaacctgacgggcctccaaa 114