miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39450_pta-MIR1315:mirbase
          Length = 192

 Score =  157 bits (79), Expect = 4e-39
 Identities = 151/175 (86%)
 Strand = Plus / Minus

                                                                       
Query: 3   gactcggttgggaacctgacgggcctccaaacgcttgacttgcgcgggtgctccactctg 62
           |||||||||||||||||||| ||||||||||  |||||| ||   | |||||||| ||||
Sbjct: 183 gactcggttgggaacctgacaggcctccaaatccttgacctggaagagtgctccagtctg 124

                                                                       
Query: 63  cagacgttcccagactcggttgggaacctgacgggcctccaaacgcttgacttgagctgg 122
           |||| | |||| |||||||||||||||||||| ||||||||||  |||| | || |||||
Sbjct: 123 cagatggtcccggactcggttgggaacctgaccggcctccaaagccttgtcctgggctgg 64

                                                                  
Query: 123 tggtccactctgcagacgctcccagactcggttggaaacctgacgggcctccaaa 177
           || |||| |||||||| | |||| ||||||||||| |||||||||||||||||||
Sbjct: 63  tgctccagtctgcagatggtcccggactcggttgggaacctgacgggcctccaaa 9



 Score = 79.8 bits (40), Expect = 7e-16
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                       
Query: 70  tcccagactcggttgggaacctgacgggcctccaaacgcttgacttgagctggtggtcca 129
           |||| |||||||||||||||||||| ||||||||||  |||||| ||     ||| ||||
Sbjct: 188 tcccggactcggttgggaacctgacaggcctccaaatccttgacctggaagagtgctcca 129

                                                           
Query: 130 ctctgcagacgctcccagactcggttggaaacctgacgggcctccaaa 177
            |||||||| | |||| ||||||||||| |||||||| ||||||||||
Sbjct: 128 gtctgcagatggtcccggactcggttgggaacctgaccggcctccaaa 81




>39412_pab-MIR3710:mirbase
          Length = 135

 Score =  107 bits (54), Expect = 3e-24
 Identities = 93/106 (87%)
 Strand = Plus / Plus

                                                                       
Query: 72  ccagactcggttgggaacctgacgggcctccaaacgcttgacttgagctggtggtccact 131
           ||||||||||||||||||||||||||||||||||  ||| || | | ||  || ||| | 
Sbjct: 9   ccagactcggttgggaacctgacgggcctccaaagtcttaaccttatctattgctccgcc 68

                                                         
Query: 132 ctgcagacgctcccagactcggttggaaacctgacgggcctccaaa 177
           ||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 69  ctgcagacgcttccagactcggttgggaacctgacgggcctccaaa 114



 Score = 97.6 bits (49), Expect = 3e-21
 Identities = 91/105 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagactcggttgggaacctgacgggcctccaaacgcttgacttgcgcgggtgctccactc 60
           |||||||||||||||||||||||||||||||||  ||| || |   |   |||||| | |
Sbjct: 10  cagactcggttgggaacctgacgggcctccaaagtcttaaccttatctattgctccgccc 69

                                                        
Query: 61  tgcagacgttcccagactcggttgggaacctgacgggcctccaaa 105
           |||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 70  tgcagacgcttccagactcggttgggaacctgacgggcctccaaa 114