miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>29191_hsa-mir-1909:mirbase
          Length = 80

 Score =  159 bits (80), Expect = 8e-40
 Identities = 80/80 (100%)
 Strand = Plus / Plus

                                                                      
Query: 17 catccaggacaatggtgagtgccggtgcctgccctggggccgtccctgcgcaggggccgg 76
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  catccaggacaatggtgagtgccggtgcctgccctggggccgtccctgcgcaggggccgg 60

                              
Query: 77 gtgctcaccgcatctgcccc 96
          ||||||||||||||||||||
Sbjct: 61 gtgctcaccgcatctgcccc 80




>31376_ppy-mir-1909:mirbase
          Length = 78

 Score =  117 bits (59), Expect = 3e-27
 Identities = 75/79 (94%), Gaps = 1/79 (1%)
 Strand = Plus / Plus

                                                                      
Query: 17 catccaggacaatggtgagtgccggtgcctgccctggggccgtccctgcgcaggggccgg 76
          |||||||||||||||||||||||||||  |||||||||||||||||||||  ||||||||
Sbjct: 1  catccaggacaatggtgagtgccggtgt-tgccctggggccgtccctgcgtgggggccgg 59

                             
Query: 77 gtgctcaccgcatctgccc 95
          |||||||||||||||||||
Sbjct: 60 gtgctcaccgcatctgccc 78