miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39359_cre-MIR1163:mirbase
Length = 400
Score = 254 bits (128), Expect = 3e-68
Identities = 131/132 (99%)
Strand = Plus / Plus
Query: 133 attgacaacgcgcccgagcgccggcgcaccggcaagaacaaggacaagtttgagatgctg 192
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 attgacaacgcgcccgagcgccggcgcaccggcaagaacaaggacaagtatgagatgctg 60
Query: 193 ccgtaccccggcaacacgctcatggatgaggctgacctgaagggcatgctgcgtgccatg 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgtaccccggcaacacgctcatggatgaggctgacctgaagggcatgctgcgtgccatg 120
Query: 253 gcgcccttcatc 264
||||||||||||
Sbjct: 121 gcgcccttcatc 132
Score = 242 bits (122), Expect = 1e-64
Identities = 131/134 (97%)
Strand = Plus / Minus
Query: 133 attgacaacgcgcccgagcgccggcgcaccggcaagaacaaggacaagtttgagatgctg 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 attgacaacgcgcccgagcgccggcgcaccggcaagaacaaggacaagtttgagatgctg 341
Query: 193 ccgtaccccggcaacacgctcatggatgaggctgacctgaagggcatgctgcgtgccatg 252
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 340 ccgtaccccggcaacacgcttatggatgaggccgacctgaagggcatgctgcgtgccatg 281
Query: 253 gcgcccttcatcaa 266
|||| |||||||||
Sbjct: 280 gcgctcttcatcaa 267
>39358_cre-MIR1163:mirbase
Length = 400
Score = 254 bits (128), Expect = 3e-68
Identities = 131/132 (99%)
Strand = Plus / Plus
Query: 133 attgacaacgcgcccgagcgccggcgcaccggcaagaacaaggacaagtttgagatgctg 192
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 attgacaacgcgcccgagcgccggcgcaccggcaagaacaaggacaagtatgagatgctg 60
Query: 193 ccgtaccccggcaacacgctcatggatgaggctgacctgaagggcatgctgcgtgccatg 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgtaccccggcaacacgctcatggatgaggctgacctgaagggcatgctgcgtgccatg 120
Query: 253 gcgcccttcatc 264
||||||||||||
Sbjct: 121 gcgcccttcatc 132
Score = 242 bits (122), Expect = 1e-64
Identities = 131/134 (97%)
Strand = Plus / Minus
Query: 133 attgacaacgcgcccgagcgccggcgcaccggcaagaacaaggacaagtttgagatgctg 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 attgacaacgcgcccgagcgccggcgcaccggcaagaacaaggacaagtttgagatgctg 341
Query: 193 ccgtaccccggcaacacgctcatggatgaggctgacctgaagggcatgctgcgtgccatg 252
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 340 ccgtaccccggcaacacgcttatggatgaggccgacctgaagggcatgctgcgtgccatg 281
Query: 253 gcgcccttcatcaa 266
|||| |||||||||
Sbjct: 280 gcgctcttcatcaa 267
