miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>32411_mmu-mir-1892:mirbase
          Length = 80

 Score =  101 bits (51), Expect = 5e-23
 Identities = 63/66 (95%), Gaps = 2/66 (3%)
 Strand = Plus / Plus

                                                                      
Query: 1  tatatttctactc--gaccaaagttttgtaagaaacaatacagaatttggggatgggagg 58
          |||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5  tatatttctactcttgaccaaagttttgtaagaaacaatacagaatttggggacgggagg 64

                
Query: 59 gaggat 64
          ||||||
Sbjct: 65 gaggat 70




>27311_eca-mir-1892:mirbase
          Length = 80

 Score = 58.0 bits (29), Expect = 7e-10
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 18 aaagttttgtaagaaacaatacagaatttgggg 50
          |||||||||||||||||||||||| ||||||||
Sbjct: 24 aaagttttgtaagaaacaatacaggatttgggg 56