miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32979_rno-mir-675:mirbase
Length = 84
Score = 77.8 bits (39), Expect = 9e-16
Identities = 67/71 (94%), Gaps = 4/71 (5%)
Strand = Plus / Plus
Query: 1 gcggcccagg-actggtgcg-aaagggcccacagtg-act-ggtgcactgtatgccctaa 56
|||||||||| ||||||||| ||||||||||||||| ||| |||||||||||||||||||
Sbjct: 2 gcggcccagggactggtgcggaaagggcccacagtggacttggtgcactgtatgccctaa 61
Query: 57 ccgctcagtcc 67
|||||||||||
Sbjct: 62 ccgctcagtcc 72
>32290_mmu-mir-675:mirbase
Length = 84
Score = 69.9 bits (35), Expect = 2e-13
Identities = 66/71 (92%), Gaps = 4/71 (5%)
Strand = Plus / Plus
Query: 1 gcggcccagg-actggtgcg-aaagggcccacagtg-act-ggtgcactgtatgccctaa 56
|||||||||| ||||||||| ||||||||||||||| ||| ||| |||||||||||||||
Sbjct: 2 gcggcccagggactggtgcggaaagggcccacagtggacttggtacactgtatgccctaa 61
Query: 57 ccgctcagtcc 67
|||||||||||
Sbjct: 62 ccgctcagtcc 72
>32291_mmu-mir-675:mirbase
Length = 84
Score = 69.9 bits (35), Expect = 2e-13
Identities = 66/71 (92%), Gaps = 4/71 (5%)
Strand = Plus / Plus
Query: 1 gcggcccagg-actggtgcg-aaagggcccacagtg-act-ggtgcactgtatgccctaa 56
|||||||||| ||||||||| ||||||||||||||| ||| ||| |||||||||||||||
Sbjct: 2 gcggcccagggactggtgcggaaagggcccacagtggacttggtacactgtatgccctaa 61
Query: 57 ccgctcagtcc 67
|||||||||||
Sbjct: 62 ccgctcagtcc 72
>28110_mml-mir-675:mirbase
Length = 73
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 42 cactgtatgccctaaccgctcag 64
||||||||||||| |||||||||
Sbjct: 43 cactgtatgccctcaccgctcag 65
