miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>28037_mml-mir-590:mirbase
          Length = 97

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 56  agtctgtaattttatgtatgagctggtttctgactaaaacgcgcag 101
           ||||||||||||||||||| ||||||| ||| ||| ||||| ||||
Sbjct: 50  agtctgtaattttatgtataagctggtctctaactgaaacgtgcag 95




>28038_mml-mir-590:mirbase
          Length = 97

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 56  agtctgtaattttatgtatgagctggtttctgactaaaacgcgcag 101
           ||||||||||||||||||| ||||||| ||| ||| ||||| ||||
Sbjct: 50  agtctgtaattttatgtataagctggtctctaactgaaacgtgcag 95




>31169_ppy-mir-590:mirbase
          Length = 97

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 58  tctgtaattttatgtatgagctggtttctgactaaaacgcgcag 101
           ||||||||||||||||| |||| || ||||| | ||||| ||||
Sbjct: 52  tctgtaattttatgtataagctagtctctgattgaaacgtgcag 95




>31170_ppy-mir-590:mirbase
          Length = 97

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 58  tctgtaattttatgtatgagctggtttctgactaaaacgcgcag 101
           ||||||||||||||||| |||| || ||||| | ||||| ||||
Sbjct: 52  tctgtaattttatgtataagctagtctctgattgaaacgtgcag 95