miRNEST 2.0, an integrative microRNA resource :: BLAST
>27674_mml-mir-27b:mirbase
Length = 97
Score = 184 bits (93), Expect = 9e-48
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 6 acctctctaacagggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 65
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
Query: 66 ttcacagtggctaagttctgcacctgaagagaaggtg 102
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagagaaggtg 97
>28384_hsa-mir-27b:mirbase
Length = 97
Score = 184 bits (93), Expect = 9e-48
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 6 acctctctaacagggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 65
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
Query: 66 ttcacagtggctaagttctgcacctgaagagaaggtg 102
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagagaaggtg 97
>30775_ppy-mir-27b:mirbase
Length = 97
Score = 184 bits (93), Expect = 9e-48
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 6 acctctctaacagggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 65
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
Query: 66 ttcacagtggctaagttctgcacctgaagagaaggtg 102
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagagaaggtg 97
>32681_rno-mir-27b:mirbase
Length = 97
Score = 184 bits (93), Expect = 9e-48
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 6 acctctctaacagggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 65
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
Query: 66 ttcacagtggctaagttctgcacctgaagagaaggtg 102
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagagaaggtg 97
>30170_ptr-mir-27b:mirbase
Length = 96
Score = 182 bits (92), Expect = 3e-47
Identities = 95/96 (98%)
Strand = Plus / Plus
Query: 7 cctctctaacagggtgcagagcttagctgattggtgaacagtgattggtttccgctttgt 66
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttgt 60
Query: 67 tcacagtggctaagttctgcacctgaagagaaggtg 102
||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcacagtggctaagttctgcacctgaagagaaggtg 96
>33156_bta-mir-27b:mirbase
Length = 97
Score = 161 bits (81), Expect = 1e-40
Identities = 93/97 (95%)
Strand = Plus / Plus
Query: 6 acctctctaacagggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 65
|||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 acctctctgacgaggtgcagagcttagctgattggtgaacagtgactggtttccgctttg 60
Query: 66 ttcacagtggctaagttctgcacctgaagagaaggtg 102
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagagaaggtg 97
>25910_gga-mir-27b:mirbase
Length = 97
Score = 143 bits (72), Expect = 3e-35
Identities = 81/84 (96%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggcta 78
||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 14 ggtgcagagcttagctgattggtgaacagtgattgtttccctctttgttcacagtggcta 73
Query: 79 agttctgcacctgaagagaaggtg 102
||||||||||||||||||||||||
Sbjct: 74 agttctgcacctgaagagaaggtg 97
>31798_mmu-mir-27b:mirbase
Length = 73
Score = 143 bits (72), Expect = 3e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggcta 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggcta 61
Query: 79 agttctgcacct 90
||||||||||||
Sbjct: 62 agttctgcacct 73
>33932_ssc-mir-27b:mirbase
Length = 80
Score = 143 bits (72), Expect = 3e-35
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggcta 78
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 5 ggtgcagagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggcta 64
Query: 79 agttctgcacctgaag 94
||||||||||||||||
Sbjct: 65 agttctgcacctgaag 80
>26416_tgu-mir-27:mirbase
Length = 91
Score = 139 bits (70), Expect = 5e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggcta 78
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 14 ggtgcagagcttagctgattggtgaacagtgattgttttcctctttgttcacagtggcta 73
Query: 79 agttctgcacctgaagag 96
||||||||||||||||||
Sbjct: 74 agttctgcacctgaagag 91
>25724_xtr-mir-27b:mirbase
Length = 96
Score = 135 bits (68), Expect = 7e-33
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 6 acctctctaacagggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 65
|||| |||| || ||||||||||||||||||||||||||||||||||| || || |||||
Sbjct: 1 acctttctaccaaggtgcagagcttagctgattggtgaacagtgattgattccctctttg 60
Query: 66 ttcacagtggctaagttctgcacctgaagaga 97
||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagaga 92
>26967_eca-mir-27b:mirbase
Length = 73
Score = 135 bits (68), Expect = 7e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggcta 78
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2 ggtgcagagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggcta 61
Query: 79 agttctgcacct 90
||||||||||||
Sbjct: 62 agttctgcacct 73
>27352_mdo-mir-27b:mirbase
Length = 97
Score = 133 bits (67), Expect = 3e-32
Identities = 88/95 (92%)
Strand = Plus / Plus
Query: 6 acctctctaacagggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 65
|||||||| ||| ||||||||||||||| |||||||||||||| | || ||||| |||||
Sbjct: 1 acctctctgacaaggtgcagagcttagccgattggtgaacagtcactgatttcctctttg 60
Query: 66 ttcacagtggctaagttctgcacctgaagagaagg 100
|||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagagaagg 95
>34566_fru-mir-27b:mirbase
Length = 74
Score = 121 bits (61), Expect = 1e-28
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 23 cagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagtt 82
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 6 cagagcttagctgattggtgaacagtgattgatttcctctttgttcacagtggctaagtt 65
Query: 83 ctgcacctg 91
|||||||||
Sbjct: 66 ctgcacctg 74
>34713_tni-mir-27b:mirbase
Length = 74
Score = 121 bits (61), Expect = 1e-28
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 23 cagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagtt 82
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 6 cagagcttagctgattggtgaacagtgattgatttcctctttgttcacagtggctaagtt 65
Query: 83 ctgcacctg 91
|||||||||
Sbjct: 66 ctgcacctg 74
>26646_cfa-mir-27b:mirbase
Length = 63
Score = 117 bits (59), Expect = 2e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 24 agagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagttc 83
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
Query: 84 tgc 86
|||
Sbjct: 61 tgc 63
>31445_oan-mir-27b:mirbase
Length = 117
Score = 93.7 bits (47), Expect = 2e-20
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 22 gcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagt 81
|||||||||||||||||||||||||||||||| | | |||||||||||||||||||||
Sbjct: 28 gcagagcttagctgattggtgaacagtgattgctggactctttgttcacagtggctaagt 87
Query: 82 tctgcacctgaagagaagg 100
||||| || | ||||||||
Sbjct: 88 tctgcgcccgcagagaagg 106
>34238_dre-mir-27b:mirbase
Length = 91
Score = 89.7 bits (45), Expect = 4e-19
Identities = 71/79 (89%), Gaps = 3/79 (3%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggcta 78
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 13 ggtgcagagcttagctgattggtgaacagtgattg---aactctttgttcacagtggcta 69
Query: 79 agttctgcacctgaagaga 97
||||||||| |||| ||||
Sbjct: 70 agttctgcatctgaggaga 88
>34240_dre-mir-27d:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 18 gggtgcagagcttagctgattggtgaacagtgattggtttccgcttt-gttcacagtggc 76
||||||||||||| |||||||||||||| ||| ||| || | ||| ||||||||||||
Sbjct: 9 gggtgcagagcttggctgattggtgaac-gtgcatggcttgtgtttttgttcacagtggc 67
Query: 77 taagttctgcacctgaagagaa 98
|||||||| |||| ||| ||||
Sbjct: 68 taagttcttcacccgaaaagaa 89
>25450_pma-mir-27b:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttctgca 87
||||||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttctgca 70
>25449_pma-mir-27a:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 63 ttgttcacagtggctaagttc 83
|||||||||||||||||||||
Sbjct: 47 ttgttcacagtggctaagttc 67
>34568_fru-mir-27e:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 63 ttgttcacagtggctaagttc 83
|||||||||||||||||||||
Sbjct: 57 ttgttcacagtggctaagttc 77
>34715_tni-mir-27e:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 63 ttgttcacagtggctaagttc 83
|||||||||||||||||||||
Sbjct: 57 ttgttcacagtggctaagttc 77
>25723_xtr-mir-27a:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>25725_xtr-mir-27c-1:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>25726_xtr-mir-27c-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>26645_cfa-mir-27a:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 39 tgttcacagtggctaagttc 58
>26966_eca-mir-27a:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27351_mdo-mir-27a:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>27491_age-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27599_sla-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27673_mml-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28187_mne-mir-27a:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28273_ggo-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28383_hsa-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30060_ppa-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30169_ptr-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30774_ppy-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>31404_lca-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>31444_oan-mir-27a:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 51 tgttcacagtggctaagttc 70
>31797_mmu-mir-27a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>32680_rno-mir-27a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>33154_bta-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>33155_bta-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>33931_ssc-mir-27a:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>34237_dre-mir-27a:mirbase
Length = 131
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 77 tgttcacagtggctaagttc 96
>34241_dre-mir-27e:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 63 tgttcacagtggctaagttc 82
