miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33053_rno-mir-3561:mirbase
Length = 109
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 tgagactgtgtcaatccagggtagacactcagaacctgagactgtgtctatccagggtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 tgagactgtgtcaatccagggtagacactcagaacctgagactgtgtctatccagggtag 79
Query: 61 acactcagaa 70
||||||||||
Sbjct: 80 acactcagaa 89
Score = 89.7 bits (45), Expect = 2e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 18 agggtagacactcagaacctgagactgtgtctatccagggtagacactcagaa 70
|||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 agggcagacactcagaacctgagactgtgtcaatccagggtagacactcagaa 53
Score = 71.9 bits (36), Expect = 5e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1 tgagactgtgtcaatccagggtagacactcagaacctgag 40
|||||||||||| |||||||||||||||||||||||||||
Sbjct: 56 tgagactgtgtctatccagggtagacactcagaacctgag 95
>33054_rno-mir-3561:mirbase
Length = 109
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 tgagactgtgtcaatccagggtagacactcagaacctgagactgtgtctatccagggtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 tgagactgtgtcaatccagggtagacactcagaacctgagactgtgtctatccagggtag 79
Query: 61 acactcagaa 70
||||||||||
Sbjct: 80 acactcagaa 89
Score = 89.7 bits (45), Expect = 2e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 18 agggtagacactcagaacctgagactgtgtctatccagggtagacactcagaa 70
|||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 agggcagacactcagaacctgagactgtgtcaatccagggtagacactcagaa 53
Score = 71.9 bits (36), Expect = 5e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1 tgagactgtgtcaatccagggtagacactcagaacctgag 40
|||||||||||| |||||||||||||||||||||||||||
Sbjct: 56 tgagactgtgtctatccagggtagacactcagaacctgag 95
