miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32786_rno-mir-199a:mirbase
Length = 110
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaagggccag 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaagggccag 108
>32787_rno-mir-199a:mirbase
Length = 110
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaagggccag 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaagggccag 108
>31920_mmu-mir-199a-2:mirbase
Length = 110
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 2 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 62 agtagtctgcacattggttagactgggcaagggccag 98
|||||||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaagggccag 108
>31921_mmu-mir-199a-2:mirbase
Length = 110
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 2 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 62 agtagtctgcacattggttagactgggcaagggccag 98
|||||||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaagggccag 108
>27582_lla-mir-199a:mirbase
Length = 110
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaaggg 94
||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaaggg 104
>27623_sla-mir-199a:mirbase
Length = 110
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaaggg 94
||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaaggg 104
>27795_mml-mir-199a-1:mirbase
Length = 110
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaaggg 94
||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaaggg 104
>28231_mne-mir-199a:mirbase
Length = 110
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaaggg 94
||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaaggg 104
>28326_ggo-mir-199a:mirbase
Length = 110
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaaggg 94
||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaaggg 104
>28514_hsa-mir-199a-2:mirbase
Length = 110
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaaggg 94
||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaaggg 104
>28515_hsa-mir-199a-2:mirbase
Length = 110
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaaggg 94
||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaaggg 104
>30115_ppa-mir-199a:mirbase
Length = 110
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaaggg 94
||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaaggg 104
>30277_ptr-mir-199a-2:mirbase
Length = 110
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaaggg 94
||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaaggg 104
>30892_ppy-mir-199a:mirbase
Length = 110
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaaggg 94
||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaaggg 104
>30893_ppy-mir-199a-2:mirbase
Length = 110
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaaggg 94
||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaaggg 104
>30894_ppy-mir-199a-2:mirbase
Length = 110
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaaggg 94
||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaaggg 104
>33272_bta-mir-199a-1:mirbase
Length = 104
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaaggg 94
||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaaggg 104
>33273_bta-mir-199a-1:mirbase
Length = 104
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgta 70
Query: 61 cagtagtctgcacattggttagactgggcaaggg 94
||||||||||||||||||||||||||||||||||
Sbjct: 71 cagtagtctgcacattggttagactgggcaaggg 104
>25989_gga-mir-199-2:mirbase
Length = 108
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 2 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 61
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 10 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 69
Query: 62 agtagtctgcacattggttagactgggcaaggg 94
|||||||||||||||||||||||||||||||||
Sbjct: 70 agtagtctgcacattggttagactgggcaaggg 102
>26496_tgu-mir-199-2:mirbase
Length = 128
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 2 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 61
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 7 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 66
Query: 62 agtagtctgcacattggttagactgggcaaggg 94
|||||||||||||||||||||||||||||||||
Sbjct: 67 agtagtctgcacattggttagactgggcaaggg 99
>26497_tgu-mir-199-2:mirbase
Length = 128
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 2 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 61
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 7 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 66
Query: 62 agtagtctgcacattggttagactgggcaaggg 94
|||||||||||||||||||||||||||||||||
Sbjct: 67 agtagtctgcacattggttagactgggcaaggg 99
>31527_oan-mir-199:mirbase
Length = 118
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 2 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 61
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 71
Query: 62 agtagtctgcacattggttagactgggcaaggg 94
|||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggg 104
>25818_xtr-mir-199a:mirbase
Length = 96
Score = 157 bits (79), Expect = 2e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 8 cctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagt 67
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 6 cctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagt 65
Query: 68 ctgcacattggttagactgggca 90
|||||||||||||||||||||||
Sbjct: 66 ctgcacattggttagactgggca 88
>34029_ssc-mir-199a-1:mirbase
Length = 76
Score = 151 bits (76), Expect = 1e-37
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 13 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 60
Query: 73 cattggttagactggg 88
||||||||||||||||
Sbjct: 61 cattggttagactggg 76
>26757_cfa-mir-199-2:mirbase
Length = 59
Score = 117 bits (59), Expect = 2e-27
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 22 ccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 80
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 59
>27083_eca-mir-199a:mirbase
Length = 61
Score = 117 bits (59), Expect = 2e-27
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggt 79
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggt 59
>27084_eca-mir-199a:mirbase
Length = 61
Score = 117 bits (59), Expect = 2e-27
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggt 79
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggt 59
>34352_dre-mir-199-1:mirbase
Length = 87
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 7 tcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtag 66
|||||||||||| ||||||||||||||||||||||||||| || | | ||||||||||
Sbjct: 1 tcctgctccgtcatcccagtgttcagactacctgttcaggatcatactggtgtacagtag 60
Query: 67 tctgcacattggttagactg 86
||||||||||||||||||||
Sbjct: 61 tctgcacattggttagactg 80
>25517_pma-mir-199a:mirbase
Length = 79
Score = 91.7 bits (46), Expect = 9e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 13 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 72
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
Query: 73 cattggttagactg 86
||||||||||||||
Sbjct: 63 cattggttagactg 76
>34625_fru-mir-199-1:mirbase
Length = 87
Score = 91.7 bits (46), Expect = 9e-20
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 7 tcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtag 66
|||||||||||| ||||||||||||||||||||||||||| | | | ||||||||||
Sbjct: 1 tcctgctccgtcatcccagtgttcagactacctgttcaggattttactggtgtacagtag 60
Query: 67 tctgcacattggttagac 84
||||||||||||||||||
Sbjct: 61 tctgcacattggttagac 78
>25988_gga-mir-199-1:mirbase
Length = 94
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 12 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 71
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
Query: 72 acattggttag 82
|||||||||||
Sbjct: 66 acattggttag 76
>26494_tgu-mir-199-1:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 80
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
Query: 81 ag 82
||
Sbjct: 62 ag 63
>26495_tgu-mir-199-1:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 80
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
Query: 81 ag 82
||
Sbjct: 62 ag 63
>34772_tni-mir-199-1:mirbase
Length = 86
Score = 79.8 bits (40), Expect = 3e-16
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 11 gctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctg 70
|||||||| |||||||||||||||||||||||| || | | ||||||||||||||
Sbjct: 4 gctccgtccacccagtgttcagactacctgttcattgtcatactggtgtacagtagtctg 63
Query: 71 cacattggttagactgggca 90
||||||||||||||||||||
Sbjct: 64 cacattggttagactgggca 83
>34626_fru-mir-199-2:mirbase
Length = 73
Score = 75.8 bits (38), Expect = 5e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 80
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
Query: 81 ag 82
||
Sbjct: 68 ag 69
>34773_tni-mir-199-2:mirbase
Length = 73
Score = 75.8 bits (38), Expect = 5e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 80
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
Query: 81 ag 82
||
Sbjct: 68 ag 69
>34353_dre-mir-199-2:mirbase
Length = 96
Score = 69.9 bits (35), Expect = 3e-13
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 80
||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 30 cccagtgttcagactacctgttcaggaattagtgtttgtacagtagtctgcacattggtt 89
Query: 81 agactgg 87
|| ||||
Sbjct: 90 aggctgg 96
>31922_mmu-mir-199b:mirbase
Length = 110
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 12 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 71
||||||| ||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 17 ctccgtctacccagtgtttagactacctgttcaggactcccaaattgtacagtagtctgc 76
Query: 72 acattggttagactgggc 89
||||||||||| ||||||
Sbjct: 77 acattggttaggctgggc 94
>25518_pma-mir-199b:mirbase
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 57 tgtacagtagtctgcacattggttagactggg 88
||||||||||||||||||||||||||||||||
Sbjct: 48 tgtacagtagtctgcacattggttagactggg 79
>27417_mdo-mir-199b:mirbase
Length = 89
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 56 ttgtacagtagtctgcacattggttagactgggc 89
||||||||||||||||||||||||||| ||||||
Sbjct: 50 ttgtacagtagtctgcacattggttaggctgggc 83
>28516_hsa-mir-199b:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 56 ttgtacagtagtctgcacattggttagactgggc 89
||||||||||||||||||||||||||| ||||||
Sbjct: 61 ttgtacagtagtctgcacattggttaggctgggc 94
>28517_hsa-mir-199b:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 56 ttgtacagtagtctgcacattggttagactgggc 89
||||||||||||||||||||||||||| ||||||
Sbjct: 61 ttgtacagtagtctgcacattggttaggctgggc 94
>30278_ptr-mir-199b:mirbase
Length = 109
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 56 ttgtacagtagtctgcacattggttagactgggc 89
||||||||||||||||||||||||||| ||||||
Sbjct: 61 ttgtacagtagtctgcacattggttaggctgggc 94
>33276_bta-mir-199b:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 56 ttgtacagtagtctgcacattggttagactgggc 89
||||||||||||||||||||||||||| ||||||
Sbjct: 51 ttgtacagtagtctgcacattggttaggctgggc 84
>34030_ssc-mir-199a-2:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 57 tgtacagtagtctgcacattggttagactgggc 89
|||||||||||||||||||||||||| ||||||
Sbjct: 48 tgtacagtagtctgcacattggttaggctgggc 80
>34031_ssc-mir-199a-2:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 57 tgtacagtagtctgcacattggttagactgggc 89
|||||||||||||||||||||||||| ||||||
Sbjct: 48 tgtacagtagtctgcacattggttaggctgggc 80
>34354_dre-mir-199-3:mirbase
Length = 98
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 16 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 75
Query: 81 agactgggc 89
|| ||||||
Sbjct: 76 aggctgggc 84
>28512_hsa-mir-199a-1:mirbase
Length = 71
Score = 56.0 bits (28), Expect = 5e-09
Identities = 58/68 (85%), Gaps = 10/68 (14%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcagga------caatgccgttgtacagtagtctgcaca 74
||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatg----tgtacagtagtctgcaca 61
Query: 75 ttggttag 82
||||||||
Sbjct: 62 ttggttag 69
>28513_hsa-mir-199a-1:mirbase
Length = 71
Score = 56.0 bits (28), Expect = 5e-09
Identities = 58/68 (85%), Gaps = 10/68 (14%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcagga------caatgccgttgtacagtagtctgcaca 74
||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatg----tgtacagtagtctgcaca 61
Query: 75 ttggttag 82
||||||||
Sbjct: 62 ttggttag 69
>30276_ptr-mir-199a-1:mirbase
Length = 70
Score = 56.0 bits (28), Expect = 5e-09
Identities = 58/68 (85%), Gaps = 10/68 (14%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcagga------caatgccgttgtacagtagtctgcaca 74
||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatg----tgtacagtagtctgcaca 61
Query: 75 ttggttag 82
||||||||
Sbjct: 62 ttggttag 69
>33793_bta-mir-3604-1:mirbase
Length = 78
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 57 tgtacagtagtctgcacattggttagactggg 88
|||||||||||||||||||||||||| |||||
Sbjct: 32 tgtacagtagtctgcacattggttaggctggg 1
>34032_ssc-mir-199b:mirbase
Length = 74
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 ttgtacagtagtctgcacattggttagactgg 87
||||||||||||||||||||||||||| ||||
Sbjct: 43 ttgtacagtagtctgcacattggttaggctgg 74
>27085_eca-mir-199b:mirbase
Length = 69
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 56 ttgtacagtagtctgcacattggttag 82
|||||||||||||||||||||||||||
Sbjct: 41 ttgtacagtagtctgcacattggttag 67
>27086_eca-mir-199b:mirbase
Length = 69
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 56 ttgtacagtagtctgcacattggttag 82
|||||||||||||||||||||||||||
Sbjct: 41 ttgtacagtagtctgcacattggttag 67
>27796_mml-mir-199a-2:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcagga 47
|||||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagga 32
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 tgtacagtagtctgcacattggttag 82
||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttag 69
>27797_mml-mir-199a-2:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcagga 47
|||||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagga 32
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 tgtacagtagtctgcacattggttag 82
||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttag 69
>31918_mmu-mir-199a-1:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcagga 47
|||||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagga 32
>31919_mmu-mir-199a-1:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcagga 47
|||||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagga 32
>33794_bta-mir-3604-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 56 ttgtacagtagtctgcacattggttag 82
|||||||||||||||||||||||||||
Sbjct: 31 ttgtacagtagtctgcacattggttag 5
>30895_ppy-mir-199b:mirbase
Length = 111
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 56 ttgtacagtagtctgcacattggttagactgggc 89
|||||||||| |||||||||||||||| ||||||
Sbjct: 62 ttgtacagtattctgcacattggttaggctgggc 95
>30896_ppy-mir-199b:mirbase
Length = 111
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 56 ttgtacagtagtctgcacattggttagactgggc 89
|||||||||| |||||||||||||||| ||||||
Sbjct: 62 ttgtacagtattctgcacattggttaggctgggc 95
>33274_bta-mir-199a-2:mirbase
Length = 71
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcagg 46
||||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagg 31
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 tgtacagtagtctgcacattggttag 82
||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttag 69
>33275_bta-mir-199a-2:mirbase
Length = 71
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcagg 46
||||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagg 31
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 tgtacagtagtctgcacattggttag 82
||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttag 69
>26756_cfa-mir-199-1:mirbase
Length = 61
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 ccagtgttcagactacctgttcagg 46
|||||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttcagg 25
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 57 tgtacagtagtctgcacattggtt 80
||||||||||||||||||||||||
Sbjct: 38 tgtacagtagtctgcacattggtt 61
>26758_cfa-mir-199-3:mirbase
Length = 59
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 ttgtacagtagtctgcacattggtt 80
|||||||||||||||||||||||||
Sbjct: 35 ttgtacagtagtctgcacattggtt 59
>34627_fru-mir-199-3:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 3e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 80
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 17 cccagtgttcagactacctgttcatcagactaaagctgaacagtagtctgcacattggtt 76
Query: 81 a 81
|
Sbjct: 77 a 77
>34774_tni-mir-199-3:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 80
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 15 cccagtgttcagactacctgttcatcagactcaagctgaacagtagtctgcacattggtt 74
Query: 81 a 81
|
Sbjct: 75 a 75
>33277_bta-mir-199c:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 tgtacagtagtctgcacattgg 78
||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattgg 65
>25819_xtr-mir-199b:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 ccccagtgttcagactacctgttc 43
|||||||||||||||||| |||||
Sbjct: 30 ccccagtgttcagactacgtgttc 53
