miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42659_tae-MIR1126:mirbase
          Length = 164

 Score =  157 bits (79), Expect = 3e-39
 Identities = 109/119 (91%)
 Strand = Plus / Minus

                                                                       
Query: 6   tactccctccgttcctaaatataagtctttgtagagattccactatgaatcacgtacgga 65
           ||||||||||||| |||||||||||||||||||||||||  |||||||| ||| |||| |
Sbjct: 163 tactccctccgtttctaaatataagtctttgtagagattttactatgaaccacatacgaa 104

                                                                      
Query: 66  tgtatatagatgcattttagagtgtagattcactcattttgctccgtatgtggtccata 124
           ||||| |||||||||||||||||||||||||| | |||||||||||||||| |||||||
Sbjct: 103 tgtatgtagatgcattttagagtgtagattcatttattttgctccgtatgtagtccata 45



 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                          
Query: 5  gtactccctccgttcctaaatataagtctttgtagagattccactatg 52
          |||||| |||||||||||||||||||||||| |||| |||||||||||
Sbjct: 1  gtactctctccgttcctaaatataagtctttatagaaattccactatg 48



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 50/57 (87%), Gaps = 2/57 (3%)
 Strand = Plus / Plus

                                                                    
Query: 110 cgtatgtggtccataagtaaaatctgtccaaaagacttatatttaagaacggaggga 166
           |||||||||| |||| ||||||||| | |||| ||||||||||||  ||||||||||
Sbjct: 106 cgtatgtggttcata-gtaaaatctctacaaa-gacttatatttagaaacggaggga 160




>42655_tae-MIR1122:mirbase
          Length = 295

 Score =  103 bits (52), Expect = 4e-23
 Identities = 88/100 (88%)
 Strand = Plus / Plus

                                                                       
Query: 25  tataagtctttgtagagattccactatgaatcacgtacggatgtatatagatgcatttta 84
           ||||||||||| ||||||||||||||  ||  || ||||||||||||||||   ||||||
Sbjct: 150 tataagtctttttagagattccactacaaactacatacggatgtatatagacatatttta 209

                                                   
Query: 85  gagtgtagattcactcattttgctccgtatgtggtccata 124
           ||||||||||||||||||||| || ||||||| |||||||
Sbjct: 210 gagtgtagattcactcattttacttcgtatgtagtccata 249



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 5   gtactccctccgttcctaaatataagtctttgtagagattccactatg 52
           |||| ||||| ||||||||||||| | |||  ||||||||||||||||
Sbjct: 293 gtacaccctctgttcctaaatatatgccttcttagagattccactatg 246




>41896_hvu-MIR1126:mirbase
          Length = 104

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 84  agagtgtagattcactcattttgctccgtatgtggtccata 124
           ||||||||  ||||||||||||| ||||||||| |||||||
Sbjct: 57  agagtgtaagttcactcattttgttccgtatgtagtccata 17




>42670_tae-MIR1137:mirbase
          Length = 148

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  ccttgtactccctccgttcctaaat 25
          |||||||||||||||||||| ||||
Sbjct: 23 ccttgtactccctccgttccaaaat 47