miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42653_tae-MIR1120:mirbase
          Length = 119

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 68  tacagtgtcaataacgttcctatattatgggacggagggagtac 111
           |||| |||||| || |||| ||||||||||||||||||||||||
Sbjct: 60  tacactgtcaaaaatgttcttatattatgggacggagggagtac 17



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 6  gtactccctccgtcccataatataggaac 34
          |||||||||||||||||||||||| ||||
Sbjct: 17 gtactccctccgtcccataatataagaac 45



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 71  agtgtcaataacgttcctatattatgggacggagggagta 110
           |||||||| ||| ||| ||||||||| |||||||||||||
Sbjct: 60  agtgtcaaaaacattcttatattatgagacggagggagta 99




>42167_osa-MIR818d:mirbase
          Length = 139

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 4   tagtactccctccgtcccataatata 29
           ||||||||||||||||||||||||||
Sbjct: 130 tagtactccctccgtcccataatata 105



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 88  tatattatgggacggagggagtac 111
           ||||||||||||||||||||||||
Sbjct: 105 tatattatgggacggagggagtac 128




>42219_osa-MIR1436:mirbase
          Length = 161

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 89  atattatgggacggagggagta 110
           ||||||||||||||||||||||
Sbjct: 33  atattatgggacggagggagta 12



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 7  tactccctccgtcccataatat 28
          ||||||||||||||||||||||
Sbjct: 12 tactccctccgtcccataatat 33



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 7   tactccctccgtcccataat 26
           ||||||||||||||||||||
Sbjct: 142 tactccctccgtcccataat 123



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 91  attatgggacggagggagta 110
           ||||||||||||||||||||
Sbjct: 123 attatgggacggagggagta 142




>41897_hvu-MIR1436:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 91  attatgggacggagggagtaca 112
           ||||||||||||||||||||||
Sbjct: 67  attatgggacggagggagtaca 88



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 6  gtactccctccgtcccataat 26
          |||||||||||||||||||||
Sbjct: 87 gtactccctccgtcccataat 67




>41895_hvu-MIR1120:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                           
Query: 12 cctccgtcccataatataggaacgttattcaca 44
          |||||||||||||||||| ||| ||| ||||||
Sbjct: 80 cctccgtcccataatataagaatgtttttcaca 48




>41833_bdi-MIR5164:mirbase
          Length = 166

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 4  tagtactccctccgtcccata 24
          |||||||||||||||||||||
Sbjct: 29 tagtactccctccgtcccata 49




>42145_osa-MIR812h:mirbase
          Length = 187

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 94  atgggacggagggagtacaa 113
           ||||||||||||||||||||
Sbjct: 20  atgggacggagggagtacaa 1