miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42673_tae-MIR1433:mirbase
Length = 149
Score = 295 bits (149), Expect = 7e-81
Identities = 149/149 (100%)
Strand = Plus / Minus
Query: 33 atggggtgtggtaagaggtacttcgggtagcccagggtgacttgcccatggaaccgccgg 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 atggggtgtggtaagaggtacttcgggtagcccagggtgacttgcccatggaaccgccgg 90
Query: 93 acgccgctctctgtggcagagagctcggctgccaagggagtttcacaggcaaatcatcct 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 acgccgctctctgtggcagagagctcggctgccaagggagtttcacaggcaaatcatcct 30
Query: 153 tggctatcgaagatggcctcttaccccca 181
|||||||||||||||||||||||||||||
Sbjct: 29 tggctatcgaagatggcctcttaccccca 1
>42217_osa-MIR1433:mirbase
Length = 129
Score = 69.9 bits (35), Expect = 8e-13
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 137 acaggcaaatcatccttggctatcgaagatggcct 171
|||||||||||||||||||||||||||||||||||
Sbjct: 35 acaggcaaatcatccttggctatcgaagatggcct 1
>41763_bdi-MIR169k:mirbase
Length = 174
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 132 gtttcacaggcaaatcatccttggctatcgaagatggcctc 172
|||| |||||||||||||||||||||||| |||||||||||
Sbjct: 58 gttttacaggcaaatcatccttggctatcaaagatggcctc 18
Score = 44.1 bits (22), Expect = 4e-05
Identities = 42/46 (91%), Gaps = 2/46 (4%)
Strand = Plus / Minus
Query: 42 ggtaagaggtacttcgggtagcccagggtgacttgcccatggaacc 87
||||||||||||| ||||||||| ||| |||||||||||| |||||
Sbjct: 160 ggtaagaggtact-cgggtagcc-aggctgacttgcccatagaacc 117
>42543_sbi-MIR169o:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 137 acaggcaaatcatccttggctat 159
|||||||||||||||||||||||
Sbjct: 23 acaggcaaatcatccttggctat 1
>42752_zma-MIR169j:mirbase
Length = 151
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 136 cacaggcaaatcatccttggctatc 160
||||||||| |||||||||||||||
Sbjct: 43 cacaggcaagtcatccttggctatc 19
>42540_sbi-MIR169l:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 136 cacaggcaaatcatccttggctatc 160
||||||||| |||||||||||||||
Sbjct: 26 cacaggcaagtcatccttggctatc 2
>42535_sbi-MIR169g:mirbase
Length = 152
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 136 cacaggcaaatcatccttggctatc 160
||||||||| |||||||||||||||
Sbjct: 43 cacaggcaagtcatccttggctatc 19
>41980_osa-MIR169q:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 136 cacaggcaaatcatccttggctatc 160
||||||||| |||||||||||||||
Sbjct: 76 cacaggcaagtcatccttggctatc 100
>41975_osa-MIR169l:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 136 cacaggcaaatcatccttggctatc 160
||||||||| |||||||||||||||
Sbjct: 33 cacaggcaagtcatccttggctatc 9
>41974_osa-MIR169k:mirbase
Length = 156
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 136 cacaggcaaatcatccttggctatc 160
||||||||| |||||||||||||||
Sbjct: 33 cacaggcaagtcatccttggctatc 9
>41759_bdi-MIR169g:mirbase
Length = 181
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 136 cacaggcaaatcatccttggctatc 160
||||||||| |||||||||||||||
Sbjct: 78 cacaggcaagtcatccttggctatc 54
>41757_bdi-MIR169e:mirbase
Length = 164
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 136 cacaggcaaatcatccttggctatc 160
||||||||| |||||||||||||||
Sbjct: 54 cacaggcaagtcatccttggctatc 30
>41111_tcc-MIR169j:mirbase
Length = 141
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 137 acaggcaaatcatccttggctatc 160
|||||||| |||||||||||||||
Sbjct: 42 acaggcaagtcatccttggctatc 19
