miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42653_tae-MIR1120:mirbase
          Length = 119

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 10 gtactccctccgtcccataatataa 34
          |||||||||||||||||||||||||
Sbjct: 17 gtactccctccgtcccataatataa 41



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                             
Query: 63 aaaaacgttcttatattatgggacagaggaagtac 97
          ||||| |||||||||||||||||| |||| |||||
Sbjct: 51 aaaaatgttcttatattatgggacggagggagtac 17



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                       
Query: 52 agtgtagtgctaaaaacgttcttatattatgggacagaggaagta 96
          |||||||||  |||||| ||||||||||||| ||| |||| ||||
Sbjct: 55 agtgtagtgtcaaaaacattcttatattatgagacggagggagta 99



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 11 tactccctccgtcccataatataa 34
          ||||||||||||| ||||||||||
Sbjct: 99 tactccctccgtctcataatataa 76




>42167_osa-MIR818d:mirbase
          Length = 139

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 10  gtactccctccgtcccataatataa 34
           |||||||||||||||||||||||||
Sbjct: 128 gtactccctccgtcccataatataa 104



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 72  cttatattatgggacagaggaagtacta 99
           ||||||||||||||| |||| |||||||
Sbjct: 103 cttatattatgggacggagggagtacta 130




>42219_osa-MIR1436:mirbase
          Length = 161

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 11 tactccctccgtcccataatataaaaa 37
          |||||||||||||||||||||| ||||
Sbjct: 12 tactccctccgtcccataatattaaaa 38



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  tactccctccgtcccataat 30
           ||||||||||||||||||||
Sbjct: 142 tactccctccgtcccataat 123




>41897_hvu-MIR1436:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 9  tgtactccctccgtcccataat 30
          ||||||||||||||||||||||
Sbjct: 88 tgtactccctccgtcccataat 67




>41895_hvu-MIR1120:mirbase
          Length = 84

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 63 aaaaacgttcttatattatgggacagagga 92
          |||||| ||||||||||||||||| |||||
Sbjct: 52 aaaaacattcttatattatgggacggagga 81