miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42653_tae-MIR1120:mirbase
          Length = 119

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 66/79 (83%), Gaps = 3/79 (3%)
 Strand = Plus / Minus

                                                                      
Query: 14 tccctccgtcccataatataagagcgtttttaacactattctagtgtcaagaacgntctt 73
          |||||||||| ||||||||||||  |||||| ||||||    | |||||| || | ||||
Sbjct: 96 tccctccgtctcataatataagaatgtttttgacacta---cactgtcaaaaatgttctt 40

                             
Query: 74 atattacgggacggaggga 92
          |||||| ||||||||||||
Sbjct: 39 atattatgggacggaggga 21



 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 66/79 (83%), Gaps = 3/79 (3%)
 Strand = Plus / Plus

                                                                      
Query: 14 tccctccgtcccataatataagagcgtttttaacactattctagtgtcaagaacgntctt 73
          ||||||||||||||||||||||| | ||||| ||   | | ||||||||| |||  ||||
Sbjct: 21 tccctccgtcccataatataagaacatttttgac---agtgtagtgtcaaaaacattctt 77

                             
Query: 74 atattacgggacggaggga 92
          |||||| | ||||||||||
Sbjct: 78 atattatgagacggaggga 96




>41895_hvu-MIR1120:mirbase
          Length = 84

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                              
Query: 16 cctccgtcccataatataagagcgtttttaacacta 51
          |||||||||||||||||||||  |||||| ||||||
Sbjct: 80 cctccgtcccataatataagaatgtttttcacacta 45




>42167_osa-MIR818d:mirbase
          Length = 139

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 14  tccctccgtcccataatataag 35
           ||||||||||||||||||||||
Sbjct: 124 tccctccgtcccataatataag 103




>42165_osa-MIR818b:mirbase
          Length = 113

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 cctccgtcccataatataagag 37
          ||||||||||||||||||||||
Sbjct: 1  cctccgtcccataatataagag 22



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  cctccgtcccataatataag 35
           ||||||||||||||||||||
Sbjct: 113 cctccgtcccataatataag 94




>42219_osa-MIR1436:mirbase
          Length = 161

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 9  gctantccctccgtcccataatat 32
          |||| |||||||||||||||||||
Sbjct: 10 gctactccctccgtcccataatat 33




>42168_osa-MIR818e:mirbase
          Length = 225

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  cctccgtcccataatataag 35
           ||||||||||||||||||||
Sbjct: 225 cctccgtcccataatataag 206