miRNEST 2.0, an integrative microRNA resource :: BLAST
>41218_csi-MIR159:mirbase
Length = 216
Score = 79.8 bits (40), Expect = 8e-16
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgc-agggtaaatcaagctgctgatctat 79
||||||||||||||||||||||||||| | | || ||||||||| ||||||||| ||||
Sbjct: 11 gtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctat 70
Query: 80 ggattccacagtccta 95
|||| |||||||||||
Sbjct: 71 ggatcccacagtccta 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 166 ctttctttggattgaagggagctctac 192
|||| ||||||||||||||||||||||
Sbjct: 181 ctttttttggattgaagggagctctac 207
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 71.9 bits (36), Expect = 2e-13
Identities = 141/173 (81%), Gaps = 6/173 (3%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| ||| | | ||| ||||| ||| ||||||||| |||||
Sbjct: 10 gtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatg 69
Query: 81 gattccacagtccta--accctaattaattatggggataggcttgcggcttgcatatgtt 138
|| |||||| |||| ||| | | | ||| || || ||| |||||||||||||| |
Sbjct: 70 aatcccacagccctatcaccatcagtcattttg---atgggcctgcggcttgcatatctc 126
Query: 139 aggagctttattacctctttgttttatctttctttggattgaagggagctcta 191
|||||||||||||||| |||| |||||| |||||||||||||||||||||
Sbjct: 127 aggagctttattacct-aatgttagatctttttttggattgaagggagctcta 178
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 69.9 bits (35), Expect = 7e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| ||||| | |||| ||||| || |||||||| | |||||
Sbjct: 10 gtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Query: 81 gattccacagtccta 95
|| ||||||||||||
Sbjct: 70 ga-tccacagtccta 83
Score = 54.0 bits (27), Expect = 4e-08
Identities = 67/79 (84%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 113 ggataggcttgcggcttgcatatgttaggagctttattacctctttgttttatctttctt 172
||||||| ||||||||||||||| | |||||||||||| ||| |||| ||| | ||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttattgcct-aatgttagatccctttt 155
Query: 173 tggattgaagggagctcta 191
|||||||||||||||||||
Sbjct: 156 tggattgaagggagctcta 174
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 69.9 bits (35), Expect = 7e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| ||||| | |||| ||||| || |||||||| | |||||
Sbjct: 10 gtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Query: 81 gattccacagtccta 95
|| ||||||||||||
Sbjct: 70 ga-tccacagtccta 83
>40338_rco-MIR159:mirbase
Length = 180
Score = 69.9 bits (35), Expect = 7e-13
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| ||||||| ||| ||||| || ||||||||| |||||
Sbjct: 3 gtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatg 62
Query: 81 gattccacagtccta 95
||| |||||| ||||
Sbjct: 63 gatcccacagcccta 77
Score = 65.9 bits (33), Expect = 1e-11
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 113 ggataggcttgcggcttgcatatgttaggagctttattacctctttgttttatctttctt 172
||||||||||| ||||||||||| | |||||||| ||||||| | | || ||| || ||
Sbjct: 98 ggataggcttgtggcttgcatatctcaggagcttcattacct-tgtattagatccttgtt 156
Query: 173 tggattgaagggagctctaca 193
|||||||||||||||||||||
Sbjct: 157 tggattgaagggagctctaca 177
>41528_sly-MIR159:mirbase
Length = 177
Score = 61.9 bits (31), Expect = 2e-10
Identities = 59/66 (89%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 128 ttgcatatgttaggagctttatt--acctctttgttttatctttctttggattgaaggga 185
|||||||||| |||||||||||| ||| |||||||| ||| || |||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttacc-ctttgtttgatcattttttggattgaaggga 171
Query: 186 gctcta 191
||||||
Sbjct: 172 gctcta 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 22 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 81
|||||||||||||||||||| | | || | |||| ||||| ||||||||| ||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 82 attccacagtccta 95
||||| ||| ||||
Sbjct: 61 attcctcagcccta 74
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 159 gttttatctttctttggattgaagggagctctaca 193
|||| ||||||||||||||||||||||||||||||
Sbjct: 140 gtttaatctttctttggattgaagggagctctaca 174
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 54.0 bits (27), Expect = 4e-08
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| ||||| | || | ||||| || ||||||||| ||||
Sbjct: 8 gtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatg 67
Query: 81 gattccacagtccta 95
||| |||||| ||||
Sbjct: 68 gatcccacagcccta 82
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctacac 194
||||||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctctacac 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 113 ggataggcttgcggcttgcatatgttaggagct 145
||||||||||| ||||||||||| | |||||||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagct 135
>40432_gma-MIR159a:mirbase
Length = 214
Score = 54.0 bits (27), Expect = 4e-08
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| |||||| || | |||| ||| ||||||| | |||||
Sbjct: 20 gtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatg 79
Query: 81 gattccacagt 91
||| |||||||
Sbjct: 80 gatcccacagt 90
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctctacac 194
|||||||||||||||||||||||||||
Sbjct: 172 ttctttggattgaagggagctctacac 198
>40397_ahy-MIR159:mirbase
Length = 197
Score = 54.0 bits (27), Expect = 4e-08
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| ||||| | ||| ||||| || ||||||| | |||||
Sbjct: 2 gtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatg 61
Query: 81 gattccacagt 91
||| |||||||
Sbjct: 62 gatcccacagt 72
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctaca 193
|||||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctctaca 179
>40311_bra-MIR159a:mirbase
Length = 185
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctctaca 193
||||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctctaca 193
||||||||||||||||||||||||||
Sbjct: 158 ttctttggattgaagggagctctaca 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctctaca 193
||||||||||||||||||||||||||
Sbjct: 180 ttctttggattgaagggagctctaca 205
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctctac 192
|||||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctctac 174
Score = 46.1 bits (23), Expect = 1e-05
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| |||||| || | |||| || ||||||| | |||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 gattccacagt 91
||| |||||||
Sbjct: 61 gatcccacagt 71
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctctac 192
|||||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctctac 174
Score = 46.1 bits (23), Expect = 1e-05
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| |||||| || | |||| || ||||||| | |||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 gattccacagt 91
||| |||||||
Sbjct: 61 gatcccacagt 71
>40016_ath-MIR159a:mirbase
Length = 184
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctctac 192
|||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctctac 184
>41922_osa-MIR159f:mirbase
Length = 188
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 172 ttggattgaagggagctctacac 194
|||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctacac 181
>40017_ath-MIR159b:mirbase
Length = 196
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctct 190
|||||||||||||||||||||||
Sbjct: 165 ttctttggattgaagggagctct 187
>39805_aly-MIR159b:mirbase
Length = 202
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctct 190
|||||||||||||||||||||||
Sbjct: 166 ttctttggattgaagggagctct 188
Score = 42.1 bits (21), Expect = 2e-04
Identities = 52/61 (85%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 24 gagctccttgaagtccaaaagaggattttgcagggtaaa-tcaagctgctgatctatgga 82
|||||||||||||| ||| |||| ||| |||||||||| | |||||||| | |||||||
Sbjct: 17 gagctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatgga 76
Query: 83 t 83
|
Sbjct: 77 t 77
