miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42655_tae-MIR1122:mirbase
          Length = 295

 Score =  103 bits (52), Expect = 4e-23
 Identities = 105/123 (85%)
 Strand = Plus / Minus

                                                                       
Query: 17  cctctgtcccaaaaagcttgtcttagatttatgtagatacggatgtatctaacactaaaa 76
           |||| |||||||||  |||||||||||||  | ||||||||||||||||||| |||||||
Sbjct: 146 cctccgtcccaaaattcttgtcttagattagtctagatacggatgtatctaatactaaaa 87

                                                                       
Query: 77  catgtctagatnaatccgtatcttgacaaatctaagacaagctttttggaacggagggag 136
           |||| || |||  || ||||| | |||||||||||| |||  ||||||| ||||||||||
Sbjct: 86  catgacttgatacatacgtatttagacaaatctaagccaaaatttttgggacggagggag 27

              
Query: 137 tat 139
           |||
Sbjct: 26  tat 24



 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 90  atccgtatcttgacaaatctaagacaagctttttggaacggagggagtat 139
           |||||||||| ||| |||||||||||||  |||||| |||||||||||||
Sbjct: 103 atccgtatctagactaatctaagacaagaattttgggacggagggagtat 152




>41879_far-MIR1122:mirbase
          Length = 300

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 50  tagatacggatgtatctaacactaaaacatgtctagatnaatccgtatcttgacaaatct 109
           ||||||||||||||||||  ||||||| |||| |||||  ||| | |||| |||||| ||
Sbjct: 181 tagatacggatgtatctacaactaaaatatgtttagatacatctgaatctagacaaaact 122

                 
Query: 110 aagaca 115
           ||||||
Sbjct: 121 aagaca 116




>42274_osa-MIR1862d:mirbase
          Length = 150

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 120 ttttggaacggagggagtatcata 143
           |||||| |||||||||||||||||
Sbjct: 104 ttttgggacggagggagtatcata 127