miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39839_aly-MIR169f:mirbase
Length = 184
Score = 58.0 bits (29), Expect = 3e-09
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 23 tcttgcatgaagagatagagagtggaactgagccaaggatgacttgccg 71
|||||||||||| ||| ||| ||||| |||||||||||||||||||||
Sbjct: 13 tcttgcatgaaggaataaagaatggaattgagccaaggatgacttgccg 61
>41609_vvi-MIR169m:mirbase
Length = 102
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 41 agagtggaactgagccaaggatgacttgccg 71
||||||||| |||||||||||||||||||||
Sbjct: 1 agagtggaagtgagccaaggatgacttgccg 31
>41754_bdi-MIR169b:mirbase
Length = 106
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 34 gagatagagagtggaactgagccaaggatgacttgccg 71
|||||||||||||||| |||||||||||||||||||
Sbjct: 1 gagatagagagtggaatgtagccaaggatgacttgccg 38
>40358_rco-MIR169c:mirbase
Length = 114
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 50 ctgagccaaggatgacttgccgcgc 74
|||||||||||||||||||||||||
Sbjct: 5 ctgagccaaggatgacttgccgcgc 29
>40050_ath-MIR169f:mirbase
Length = 167
Score = 50.1 bits (25), Expect = 7e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 23 tcttgcatgaagagatagagagtggaactgagccaaggatgacttgccg 71
|||||||||||| ||| || ||||| |||||||||||||||||||||
Sbjct: 4 tcttgcatgaaggaataacgaatggaattgagccaaggatgacttgccg 52
>41612_vvi-MIR169p:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 44 gtggaactgagccaaggatgacttgccg 71
|||||| |||||||||||||||||||||
Sbjct: 4 gtggaattgagccaaggatgacttgccg 31
>41608_vvi-MIR169l:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 44 gtggaactgagccaaggatgacttgccg 71
|||||| |||||||||||||||||||||
Sbjct: 4 gtggaattgagccaaggatgacttgccg 31
>41368_ptc-MIR169n:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 41 agagtggaactgagccaaggatgacttgccgc 72
|||||||| ||||||||||||||||||||||
Sbjct: 1 agagtggatttgagccaaggatgacttgccgc 32
>41611_vvi-MIR169o:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 tgagccaaggatgacttgccgc 72
||||||||||||||||||||||
Sbjct: 11 tgagccaaggatgacttgccgc 32
>41610_vvi-MIR169n:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 gagtggaactgagccaaggatgacttgccg 71
|||||||| ||||||||||||||||||||
Sbjct: 2 gagtggaatagagccaaggatgacttgccg 31
>41114_tcc-MIR169m:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgagccaaggatgacttgccg 71
|||||||||||||||||||||
Sbjct: 21 tgagccaaggatgacttgccg 41
>40453_gma-MIR169e:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgagccaaggatgacttgccg 71
|||||||||||||||||||||
Sbjct: 32 tgagccaaggatgacttgccg 52
>40452_gma-MIR169d:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgagccaaggatgacttgccg 71
|||||||||||||||||||||
Sbjct: 14 tgagccaaggatgacttgccg 34
>40051_ath-MIR169g:mirbase
Length = 379
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgagccaaggatgacttgccg 71
|||||||||||||||||||||
Sbjct: 144 tgagccaaggatgacttgccg 164
>40049_ath-MIR169e:mirbase
Length = 217
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgagccaaggatgacttgccg 71
|||||||||||||||||||||
Sbjct: 69 tgagccaaggatgacttgccg 89
>40048_ath-MIR169d:mirbase
Length = 154
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgagccaaggatgacttgccg 71
|||||||||||||||||||||
Sbjct: 41 tgagccaaggatgacttgccg 61
>39840_aly-MIR169g:mirbase
Length = 202
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgagccaaggatgacttgccg 71
|||||||||||||||||||||
Sbjct: 63 tgagccaaggatgacttgccg 83
>39838_aly-MIR169e:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgagccaaggatgacttgccg 71
|||||||||||||||||||||
Sbjct: 51 tgagccaaggatgacttgccg 71
>39837_aly-MIR169d:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgagccaaggatgacttgccg 71
|||||||||||||||||||||
Sbjct: 41 tgagccaaggatgacttgccg 61
>41617_vvi-MIR169u:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 44 gtggaactgagccaaggatgacttgccg 71
|||||| |||| ||||||||||||||||
Sbjct: 4 gtggaattgagtcaaggatgacttgccg 31
>41614_vvi-MIR169r:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 44 gtggaactgagccaaggatgacttgccg 71
|||||| |||| ||||||||||||||||
Sbjct: 4 gtggaattgagtcaaggatgacttgccg 31
>41613_vvi-MIR169q:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 gagccaaggatgacttgccg 71
||||||||||||||||||||
Sbjct: 12 gagccaaggatgacttgccg 31
>41605_vvi-MIR169i:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 44 gtggaactgagccaaggatgacttgccg 71
|||||| |||||||||||||||| ||||
Sbjct: 4 gtggaattgagccaaggatgactggccg 31
>41604_vvi-MIR169h:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 44 gtggaactgagccaaggatgacttgccg 71
|||||| ||||||||||||| |||||||
Sbjct: 4 gtggaattgagccaaggatggcttgccg 31
>41597_vvi-MIR169a:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 7e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 40 gagagtggaactgagccaaggatgacttgccg 71
|||||||||| |||||||||||||||||||
Sbjct: 1 gagagtggaatgcagccaaggatgacttgccg 32
>40690_mtr-MIR169m:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 gagccaaggatgacttgccg 71
||||||||||||||||||||
Sbjct: 6 gagccaaggatgacttgccg 25
>40682_mtr-MIR169e:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 gagccaaggatgacttgccg 71
||||||||||||||||||||
Sbjct: 7 gagccaaggatgacttgccg 26
