miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42660_tae-MIR1127:mirbase
          Length = 150

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 76/89 (85%), Gaps = 2/89 (2%)
 Strand = Plus / Minus

                                                                       
Query: 15  atactccctccgtccagaaatacttgtcgcataaatggatgaaaatggatgtatctagaa 74
           ||||||||||||| | ||| |||||||| || ||||| || |||||||||||||||| ||
Sbjct: 135 atactccctccgttcggaattacttgtcacaaaaatg-ataaaaatggatgtatctacaa 77

                                        
Query: 75  ttaaaagtacatctagatacattcatttc 103
            ||||| | ||| |||||||||| |||||
Sbjct: 76  ctaaaa-tgcatttagatacatttatttc 49




>42661_tae-MIR1128:mirbase
          Length = 190

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 95  attcatttcaatgacaagtattttcggacggaggtagta 133
           ||||||||  |||||||||||||||||||||||| ||||
Sbjct: 72  attcattttgatgacaagtattttcggacggagggagta 34



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                               
Query: 61  ggatgtatctagaattaaaagtacatctagatacat 96
           |||||||||||||| ||||| |||||||||||||||
Sbjct: 81  ggatgtatctagaactaaaa-tacatctagatacat 115




>42669_tae-MIR1136:mirbase
          Length = 107

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 37/40 (92%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                  
Query: 57 aaatggatgtatctagaattaaaagtacatctagatacat 96
          |||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 76 aaatggatgtatttagaactaaaa-tacatctagatacat 38




>42668_tae-MIR1135:mirbase
          Length = 109

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 63/75 (84%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                       
Query: 59  atggatgtatctagaattaaaagtacatctagatacattcatttcaatgacaagtatttt 118
           |||||||||||||||| ||||| ||| |||||||||||  |||||   |||||||| || 
Sbjct: 35  atggatgtatctagaactaaaa-tacgtctagatacatctatttctgcgacaagtaattc 93

                          
Query: 119 cggacggaggtagta 133
           || ||||||| ||||
Sbjct: 94  cgaacggagggagta 108



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 16  tactccctccgtccagaaatacttgtcgcataaatggatg 55
           |||||||||||| | ||| ||||||||||| |||| ||||
Sbjct: 108 tactccctccgttcggaattacttgtcgcagaaatagatg 69