miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42661_tae-MIR1128:mirbase
          Length = 190

 Score = 81.8 bits (41), Expect = 1e-16
 Identities = 74/84 (88%), Gaps = 2/84 (2%)
 Strand = Plus / Plus

                                                                       
Query: 27  tactccctccgtccggaattatttgtcatcaaaatggatggaaa--tggatgtatctaca 84
           ||||||||||||||| || || |||||||||||||| ||  |||   ||||||||||| |
Sbjct: 34  tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaaaggggatgtatctaga 93

                                   
Query: 85  actaaaatacatctagatacatcc 108
           ||||||||||||||||||||||||
Sbjct: 94  actaaaatacatctagatacatcc 117



 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 26  ttactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatcta 82
           ||||||||||||||||||| || ||||||||||||||||| |||  |||||||||||
Sbjct: 163 ttactccctccgtccggaaatagttgtcatcaaaatggatagaaggggatgtatcta 107



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 115 atgacaagtatttccggacggagggag 141
           ||||||||||||| |||||||||||||
Sbjct: 62  atgacaagtattttcggacggagggag 36




>42668_tae-MIR1135:mirbase
          Length = 109

 Score = 79.8 bits (40), Expect = 6e-16
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                       
Query: 70  atggatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtatttcc 129
           ||||||||||||| ||||||||||| |||||||||||| |||||   |||||||| ||||
Sbjct: 35  atggatgtatctagaactaaaatacgtctagatacatctatttctgcgacaagtaattcc 94

                       
Query: 130 ggacggagggag 141
           | ||||||||||
Sbjct: 95  gaacggagggag 106




>42660_tae-MIR1127:mirbase
          Length = 150

 Score = 79.8 bits (40), Expect = 6e-16
 Identities = 71/80 (88%), Gaps = 1/80 (1%)
 Strand = Plus / Minus

                                                                       
Query: 27  tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
           |||||||||||| |||||||| ||||||  |||||| ||  |||||||||||||||||||
Sbjct: 134 tactccctccgttcggaattacttgtcacaaaaatg-ataaaaatggatgtatctacaac 76

                               
Query: 87  taaaatacatctagatacat 106
           |||||| ||| |||||||||
Sbjct: 75  taaaatgcatttagatacat 56




>42669_tae-MIR1136:mirbase
          Length = 107

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                       
Query: 67  gaaatggatgtatctacaactaaaatacatctagatacatccat 110
           ||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 77  gaaatggatgtatttagaactaaaatacatctagatacatccat 34




>41879_far-MIR1122:mirbase
          Length = 300

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 72  ggatgtatctacaactaaaatacatctagatacatc 107
           ||||||||||||||||||||||  | ||||||||||
Sbjct: 174 ggatgtatctacaactaaaatatgtttagatacatc 139